RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MAPK11Q15759 364 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 CDC37Q16543 378 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 FUT11Q495W5 492 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 PRAMEF8Q5VWM4 474 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 OR4C11Q6IEV9 310 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZNF770Q6IQ21 691 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 SIGLEC15Q6ZMC9 328 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZNF497Q6ZNH5 498 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 Q6ZRP5 223 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 CPEB2Q7Z5Q1 589 aaKnown RBP3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 PRUNE1Q86TP1 453 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 PRSS35Q8N3Z0 413 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 CHCHD4Q8N4Q1 142 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 PSMA8Q8TAA3 256 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 ATP6V0A1Q93050 837 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 MOCOSQ96EN8 888 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 PDLIM5Q96HC4 596 aaKnown RBP3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZNF300Q96RE9 604 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 PI4K2AQ9BTU6 479 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 NACAP1Q9BZK3 213 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 HOXD1Q9GZZ0 328 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 UBQLN3Q9H347 655 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 EGLN3Q9H6Z9 239 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 MTHFD2LQ9H903 347 aaPredicted RBP3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 EXOC1Q9NV70 894 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 KNSTRNQ9Y448 316 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 CSNK1G3Q9Y6M4 447 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 RNF215Q9Y6U7 377 aa3.14□□□□□ -1.91
TRAPPC13-204ENST00000438419 KPNA7A9QM74 516 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 SLC1A7O00341 560 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 CEACAM4O75871 244 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 PNPP00491 289 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 MT-ND3P03897 115 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 CPA3P15088 417 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 PRKACGP22612 351 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 CLDN17P56750 224 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 IRX4P78413 519 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 ARHGAP1Q07960 439 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 CBX3Q13185 183 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 RPS6KA1Q15418 735 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 ACKR1Q16570 336 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 SGCBQ16585 318 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 MTHFSDQ2M296 383 aaKnown RBP3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 KLHL10Q6JEL2 608 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 ALKBH5Q6P6C2 394 aaKnown RBP3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZNF613Q6PF04 617 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 CHMP1BQ7LBR1 199 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 LRRTM1Q86UE6 522 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 KLHDC8AQ8IYD2 350 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 TDHQ8IZJ6 230 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 OR4D10Q8NGI6 311 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZNF519Q8TB69 540 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 CHURC1Q8WUH1 139 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 FAM46BQ96A09 425 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 RFT1Q96AA3 541 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 NXPE2Q96DL1 559 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZNF599Q96NL3 588 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 NEDD4LQ96PU5 975 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 SYT11Q9BT88 431 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 DPEP2Q9H4A9 486 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 SPHK2Q9NRA0 654 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 FBXL4Q9UKA2 621 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 PRSS21Q9Y6M0 314 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 PFASO15067 1338 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 NPHP3Q7Z494 1330 aa3.13□□□□□ -1.91
TRAPPC13-204ENST00000438419 A0A0J9YWU9 116 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 MTMR11A4FU01 709 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 C5orf51A6NDU8 294 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 ANTXRLA6NF34 631 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 ANKDD1BA6NHY2 528 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 H7C423 109 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 CACNB4O00305 520 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 SURF4O15260 269 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 KIF5CO60282 957 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 CYTIPO60759 359 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 RBMS1P29558 406 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 SOX3P41225 446 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 SMSP52788 366 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 OR1D5P58170 312 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 FKBP1BP68106 108 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 ARF5P84085 180 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 SLC34A1Q06495 639 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 TRA2AQ13595 282 aaKnown RBP eCLIP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 AARDQ4LEZ3 155 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 FASTKD1Q53R41 847 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 ARMCX4Q5H9R4 360 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 FBXL22Q6P050 247 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 KIF6Q6ZMV9 814 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 FRRS1Q6ZNA5 592 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 C5orf24Q7Z6I8 188 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 ZER1Q7Z7L7 766 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 ASPGQ86U10 573 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 CATSPERDQ86XM0 798 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 SERPINA12Q8IW75 414 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 PEX5LQ8IYB4 626 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 TCEANCQ8N8B7 351 aa3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 RNASE8Q8TDE3 154 aaKnown RBP3.12□□□□□ -1.91
TRAPPC13-204ENST00000438419 BCL2L2Q92843 193 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms