RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 ITGAXP20702 1163 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 CD1CP29017 333 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 CORO7P57737 925 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 ARF3P61204 181 aaPredicted RBP14.37□□□□□ -0.11
TMEM40-204ENST00000435218 CFHR1Q03591 330 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 SRSF11Q05519 484 aaKnown RBP14.37□□□□□ -0.11
TMEM40-204ENST00000435218 SUZ12Q15022 739 aaKnown RBP14.37□□□□□ -0.11
TMEM40-204ENST00000435218 CLPPQ16740 277 aaPredicted RBP14.37□□□□□ -0.11
TMEM40-204ENST00000435218 FAM174BQ3ZCQ3 159 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 VPS26BQ4G0F5 336 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 FRMPD2BQ6IN97 320 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 FAM71E1Q6IPT2 247 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 C8orf82Q6P1X6 216 aaPredicted RBP14.37□□□□□ -0.11
TMEM40-204ENST00000435218 C16orf89Q6UX73 402 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 FAM92BQ6ZTR7 304 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 PRSS42Q7Z5A4 293 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 RETREG3Q86VR2 466 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 PGAM4Q8N0Y7 254 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 KRTCAP2Q8N6L1 136 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 SUMF1Q8NBK3 374 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 OR8J2Q8NGG1 315 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 CLHC1Q8NHS4 586 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 C16orf78Q8WTQ4 265 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 ZNF764Q96H86 408 aaPredicted RBP14.37□□□□□ -0.11
TMEM40-204ENST00000435218 SLC45A3Q96JT2 553 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 ZNF285Q96NJ3 590 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 TGM7Q96PF1 710 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 FCRL4Q96PJ5 515 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 NPAS2Q99743 824 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 CADM1Q9BY67 442 aaKnown RBP14.37□□□□□ -0.11
TMEM40-204ENST00000435218 KLHL25Q9H0H3 589 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 SMOC1Q9H4F8 434 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 KLHL31Q9H511 634 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 FAM60AQ9NP50 221 aa14.37□□□□□ -0.11
TMEM40-204ENST00000435218 NUP214P35658 2090 aaPredicted RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 C9JVG2 144 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ANKRD65E5RJM6 399 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 TXNDC9O14530 226 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 SCAMP2O15127 329 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ERI3O43414 337 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 TBX19O60806 448 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 SLC34A2O95436 690 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ZNF806P0C7X5 589 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 MSL3P1P0C860 447 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 NQO1P15559 274 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 CSF2RBP32927 897 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 GABRA4P48169 554 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 DUSP3P51452 185 aaPredicted RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ATXN3P54252 364 aaPredicted RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 SLC25A3Q00325 362 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ART3Q13508 389 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 PDE7AQ13946 482 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 CCDC6Q16204 474 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 UGT8Q16880 541 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 TIGD2Q4W5G0 525 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 SPANXN4Q5MJ08 99 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 CCNYL2Q5T2Q4 361 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 NKAIN2Q5VXU1 208 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 GUSBP11Q6P575 273 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 KMT5CQ86Y97 462 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 DSELQ8IZU8 1212 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 TMEM132CQ8N3T6 1108 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 TEFMQ96QE5 360 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 RAB3IPQ96QF0 476 aaPredicted RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 DPYSL5Q9BPU6 564 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 C17orf62Q9BQA9 187 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ROGDIQ9GZN7 287 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 MAP10Q9P2G4 905 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ATP6V1HQ9UI12 483 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 RRP15Q9Y3B9 282 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 COL27A1Q8IZC6 1860 aaPredicted RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 LOC105369274A0A096LPK9 316 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 IGHV5-51A0A0C4DH38 117 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 LOC102723532A0A0G2JNH3 316 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ARHGAP10A1A4S6 786 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 C4orf51C9J302 202 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 RTCAO00442 366 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 P2RX6O15547 441 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 FLRT2O43155 660 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 KIF1CO43896 1103 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 PRAMEF10O60809 474 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 MYF5P13349 255 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 HIST1H1TP22492 207 aaPredicted RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 HPCAL1P37235 193 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 GRK6P43250 576 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 SSR2P43308 183 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 HNRNPFP52597 415 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 MAPK12P53778 367 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 PLA2G16P53816 162 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 KCNJ2P63252 427 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 FOXM1Q08050 763 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 HKDC1Q2TB90 917 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 MRM1Q6IN84 353 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 TCEAL6Q6IPX3 200 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ZNF793Q6ZN11 406 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 R3HCC1LQ7Z5L2 792 aaKnown RBP14.36□□□□□ -0.11
TMEM40-204ENST00000435218 OR4N4Q8N0Y3 316 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 ARHGAP24Q8N264 748 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 KIF2BQ8N4N8 673 aa14.36□□□□□ -0.11
TMEM40-204ENST00000435218 KCT2Q8NC54 265 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms