RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 MEOX1P50221 254 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 ITGA8P53708 1063 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 KRTAP10-9P60411 292 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 OLR1P78380 273 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 CSHL1Q14406 222 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 PHKG1Q16816 387 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 PAQR3Q6TCH7 311 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 C3P1Q6ZMU1 363 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 ZNF227Q86WZ6 799 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 AGGF1Q8N302 714 aaeCLIP13.93□□□□□ -0.18
PRKDC-203ENST00000432581 FAM57AQ8TBR7 257 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 MAGOHBQ96A72 148 aaKnown RBP13.93□□□□□ -0.18
PRKDC-203ENST00000432581 PYCR2Q96C36 320 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 PRDM9Q9NQV7 894 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 IGKV3D-11A0A0A0MRZ8 115 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 TCRBV16S1A1N1A0A5B0 115 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 DNAJB6O75190 326 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 RNH1P13489 461 aaKnown RBP13.92□□□□□ -0.18
PRKDC-203ENST00000432581 PGAM1P18669 254 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 PTGER1P34995 402 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 SCTRP47872 440 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 CDKN2DP55273 166 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 IL2P60568 153 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 CRYMQ14894 314 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 TMEM211Q6ICI0 200 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 KIAA0408Q6ZU52 694 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 NAT8LQ8N9F0 302 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 NFAM1Q8NET5 270 aaPredicted RBP13.92□□□□□ -0.18
PRKDC-203ENST00000432581 TRPV3Q8NET8 790 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 UTP15Q8TED0 518 aaKnown RBP13.92□□□□□ -0.18
PRKDC-203ENST00000432581 ASB5Q8WWX0 329 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 SLC5A11Q8WWX8 675 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 FBXL8Q96CD0 374 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 OR4K3Q96R72 315 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 IGSF5Q9NSI5 407 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 NEU2Q9Y3R4 380 aa13.92□□□□□ -0.18
PRKDC-203ENST00000432581 A0A1B0GTH9 108 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 TTC4O95801 387 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 B3GALT4O96024 378 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 TPOP07202 933 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 ENO2P09104 434 aaPredicted RBP13.91□□□□□ -0.18
PRKDC-203ENST00000432581 TFEBP19484 476 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 MAOAP21397 527 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 CLCN2P51788 898 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 BTG2P78543 158 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 PDAP1Q13442 181 aaKnown RBP13.91□□□□□ -0.18
PRKDC-203ENST00000432581 TERF2Q15554 542 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 CATSPEREQ5SY80 951 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 RBM20Q5T481 1227 aaKnown RBP13.91□□□□□ -0.18
PRKDC-203ENST00000432581 CCDC137Q6PK04 289 aaKnown RBP13.91□□□□□ -0.18
PRKDC-203ENST00000432581 GALNT7Q86SF2 657 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 CD163Q86VB7 1156 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 GAS2L3Q86XJ1 694 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 SULF2Q8IWU5 870 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 PPIL6Q8IXY8 311 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 CYP4Z2PQ8N1L4 340 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 GPATCH11Q8N954 259 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 B3GNT7Q8NFL0 401 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 C16orf52Q8NHV5 167 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 NEIL2Q969S2 332 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 NAP1L3Q99457 506 aaPredicted RBP13.91□□□□□ -0.18
PRKDC-203ENST00000432581 SLC6A16Q9GZN6 736 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 MMACHCQ9Y4U1 282 aa13.91□□□□□ -0.18
PRKDC-203ENST00000432581 SCN3AQ9NY46 2000 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 USP27XA6NNY8 438 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 FOXO6A8MYZ6 492 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 PEX1O43933 1283 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 CDC40O60508 579 aaKnown RBP eCLIP13.9□□□□□ -0.181e-10■■■■□ 20.3
PRKDC-203ENST00000432581 GABRB3P28472 473 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 RAB8AP61006 207 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 REEP5Q00765 189 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 CYP1B1Q16678 543 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 ARHGAP11AQ6P4F7 1023 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 CNTN4Q8IWV2 1026 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 RASGEF1CQ8N431 466 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 TMEM156Q8N614 296 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 ZFP62Q8NB50 900 aaPredicted RBP13.9□□□□□ -0.18
PRKDC-203ENST00000432581 APCDD1LQ8NCL9 501 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 GRK7Q8WTQ7 553 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 AIF1LQ9BQI0 150 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 NAT9Q9BTE0 207 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 TP63Q9H3D4 680 aaPredicted RBP13.9□□□□□ -0.18
PRKDC-203ENST00000432581 PELI2Q9HAT8 420 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 ZFATQ9P243 1243 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 DYRK1BQ9Y463 629 aa13.9□□□□□ -0.18
PRKDC-203ENST00000432581 TRBV11-1A0A0K0K1C0 115 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 HS6ST1O60243 411 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 GUCA1CO95843 209 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 AHSGP02765 367 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 SERPINA6P08185 405 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 IGFBP2P18065 325 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 CHRNB4P30926 498 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 RFC3P40938 356 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 CMPK2Q5EBM0 449 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 SPANXN3Q5MJ09 141 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 CEP128Q6ZU80 1094 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 ANKRD53Q8N9V6 530 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 LILRB4Q8NHJ6 448 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 RND1Q92730 232 aa13.89□□□□□ -0.19
PRKDC-203ENST00000432581 PBKQ96KB5 322 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms