RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TM4SF19Q96DZ7 209 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 SPDL1Q96EA4 605 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 TMEM74Q96NL1 305 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 QRFPRQ96P65 431 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 TSSK3Q96PN8 268 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 MAP3K3Q99759 626 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 ZNF717Q9BY31 904 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 SLC6A16Q9GZN6 736 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 CHRNA10Q9GZZ6 450 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 CLMPQ9H6B4 373 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 EFCAB1Q9HAE3 211 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 SLC52A3Q9NQ40 469 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 PCDHGB2Q9Y5G2 931 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 U3KQA8 63 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 GOLGA4Q13439 2230 aaKnown RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 A0A0J9YVX5 310 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 EME2A4GXA9 379 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-206ENST00000431390 B4GAT1O43505 415 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 SLC35G6P0C7Q6 338 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 PRPS1L1P21108 318 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 MXRA7P84157 204 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 ZNF763Q0D2J5 394 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 SPRED1Q7Z699 444 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 PLXDC1Q8IUK5 500 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 CAMKVQ8NCB2 501 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 RBM15BQ8NDT2 890 aaKnown RBP17.37■□□□□ 0.37
HMGN1-206ENST00000431390 WDR48Q8TAF3 677 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 NAT6Q93015 286 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 RERGQ96A58 199 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-206ENST00000431390 RCN3Q96D15 328 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 MS4A6EQ96DS6 147 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 TCTN2Q96GX1 697 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 KLHL25Q9H0H3 589 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 SYNPO2LQ9H987 977 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 NDUFAF1Q9Y375 327 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 ATRXP46100 2492 aa17.37■□□□□ 0.37
HMGN1-206ENST00000431390 SPAARA0A1B0GVQ0 90 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 A0A1W2PP18 115 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 GNG14A0A1W2PPG7 69 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 SLC9B1P1A6NJY1 282 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 FBP2O00757 339 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 GYG2O15488 501 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 C9P02748 559 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 MYF5P13349 255 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 CAPN3P20807 821 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 BSGP35613 385 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 CPOXP36551 454 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 TSFMP43897 325 aaKnown RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 GSTM5P46439 218 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 GFERP55789 205 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 SQSTM1Q13501 440 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 SUZ12Q15022 739 aaKnown RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 DPY19L1Q2PZI1 675 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 MMEL1Q495T6 779 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 DNAL1Q4LDG9 190 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 ZC3H12BQ5HYM0 836 aaKnown RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 MANEAQ5SRI9 462 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 NKAIN2Q5VXU1 208 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 REP15Q6BDI9 236 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 WDR74Q6RFH5 385 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 FAM92BQ6ZTR7 304 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 NUDT13Q86X67 352 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 RIMKLAQ8IXN7 391 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 ZNF655Q8N720 491 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 OR2L5Q8NG80 312 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 CLHC1Q8NHS4 586 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 TESCQ96BS2 214 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 SLC45A3Q96JT2 553 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 EGLN2Q96KS0 407 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 TGM7Q96PF1 710 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 FCRL4Q96PJ5 515 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 AICDAQ9GZX7 198 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 DNAAF2Q9NVR5 837 aaKnown RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 NDE1Q9NXR1 346 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 KLK13Q9UKR3 277 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 WBP11Q9Y2W2 641 aaKnown RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 NEUROG3Q9Y4Z2 214 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 MN1Q10571 1320 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 URADA6NGE7 173 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 CCDC154A6NI56 674 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 AIM2O14862 343 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 ANGPT2O15123 496 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 IL6P05231 212 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 KLK1P06870 262 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 KRT16P08779 473 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 CD1CP29017 333 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 TPP2P29144 1249 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 NUDT2P50583 147 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 DUSP3P51452 185 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-206ENST00000431390 TGM3Q08188 693 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 PROX2Q3B8N5 592 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 INAVAQ3KP66 663 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 VPS26BQ4G0F5 336 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 TOR1AIP1Q5JTV8 583 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 OR4C11Q6IEV9 310 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 GUSBP11Q6P575 273 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 TRIM40Q6P9F5 258 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 UBE3DQ7Z6J8 389 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 PCYOX1LQ8NBM8 494 aa17.36■□□□□ 0.37
HMGN1-206ENST00000431390 FBXO27Q8NI29 283 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms