RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 LINC00696Q6ZRV3 163 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 CEP128Q6ZU80 1094 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 ABHD13Q7L211 337 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 LRRC70Q7Z2Q7 622 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 CPEB2Q7Z5Q1 589 aaKnown RBP17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 SIRT6Q8N6T7 355 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 RHEBL1Q8TAI7 183 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 TBC1D20Q96BZ9 403 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 MS4A6EQ96DS6 147 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 PTCD3Q96EY7 689 aaKnown RBP17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 VPS50Q96JG6 964 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 TSPYL1Q9H0U9 437 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 RIC8BQ9NVN3 520 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 NTNG1Q9Y2I2 539 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 PCDHGA10Q9Y5H3 936 aa17.04■□□□□ 0.32
SSR4P1-202ENST00000429427 FAM227AF5H4B4 570 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 KLK8O60259 260 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 KLHL2O95198 593 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 TYK2P29597 1187 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 CASP2P42575 452 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 CHIT1Q13231 466 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 MFAP5Q13361 173 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 ABRAXAS2Q15018 415 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 B3GNTL1Q67FW5 361 aaPredicted RBP17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 CCDC91Q7Z6B0 441 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 CA13Q8N1Q1 262 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 ZADH2Q8N4Q0 377 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 PLPP5Q8NEB5 264 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 PPP4R1Q8TF05 950 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 GAL3ST3Q96A11 431 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 SNRNP40Q96DI7 357 aaKnown RBP17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 TRIM44Q96DX7 344 aaPredicted RBP17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 QRFPRQ96P65 431 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 TUBB6Q9BUF5 446 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 CAPS2Q9BXY5 557 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 TXLNGYQ9BZA5 131 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 EPB41L4BQ9H329 900 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 SLAMF7Q9NQ25 335 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 PTGFRNQ9P2B2 879 aa17.03■□□□□ 0.32
SSR4P1-202ENST00000429427 CLEC18AA5D8T8 446 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 K7EPI3 171 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 CLGNO14967 610 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 B4GALT2O60909 372 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 H2AFYO75367 372 aaKnown RBP17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 CLEC3AO75596 197 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 S100BP04271 92 aaPredicted RBP17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 RHOXF2BP0C7M4 288 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 IL10P22301 178 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 BTG2P78543 158 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 PCDH1Q08174 1060 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 RUNX2Q13950 521 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 SETDB1Q15047 1291 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 ACAP2Q15057 778 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 TBCCQ15814 346 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 FAM83EQ2M2I3 478 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 TECRLQ5HYJ1 363 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 CLEC18BQ6UXF7 455 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 ISLR2Q6UXK2 745 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 UBE3DQ7Z6J8 389 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 GSPT2Q8IYD1 628 aaKnown RBP17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 KRT78Q8N1N4 520 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 CLEC18CQ8NCF0 446 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 CATSPER1Q8NEC5 780 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 METTL21AQ8WXB1 218 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 TM9SF4Q92544 642 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 RHOXF2Q9BQY4 288 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 PITHD1Q9GZP4 211 aaPredicted RBP17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 VPS11Q9H270 941 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 RHBGQ9H310 441 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 CLDN16Q9Y5I7 305 aa17.02■□□□□ 0.32
SSR4P1-202ENST00000429427 IGKV3D-11A0A0A0MRZ8 115 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 MAGEB17A8MXT2 336 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 ERI3O43414 337 aaKnown RBP17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 KLHL41O60662 606 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 INHBAP08476 426 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 MYBL2P10244 700 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 GSTM2P28161 218 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 HNRNPFP52597 415 aaKnown RBP17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 BTN3A2P78410 334 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 IRF8Q02556 426 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 NAA30Q147X3 362 aaPredicted RBP17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 NSDHLQ15738 373 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 PFKFB4Q16877 469 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 SFT2D3Q587I9 215 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 IRAK1BP1Q5VVH5 260 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 PLAG1Q6DJT9 500 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 RIPOR1Q6ZS17 1223 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 CISD2Q8N5K1 135 aaKnown RBP17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 TMEM52Q8NDY8 209 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 TTLQ8NG68 377 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 CCT6BQ92526 530 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 SEC16BQ96JE7 1060 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 BARD1Q99728 777 aaKnown RBP17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 NPAS2Q99743 824 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 EFCAB11Q9BUY7 163 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 ILKAPQ9H0C8 392 aaPredicted RBP17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 PLA2G3Q9NZ20 509 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 OPTCQ9UBM4 332 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 ZNF180Q9UJW8 692 aa17.01■□□□□ 0.31
SSR4P1-202ENST00000429427 USP9YO00507 2555 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms