RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 HAUS8Q9BT25 410 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 REXO4Q9GZR2 422 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 LRTM1Q9HBL6 345 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLC6A13Q9NSD5 602 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 NMRK1Q9NWW6 199 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 OCIAD1Q9NX40 245 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 STX18Q9P2W9 335 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 VPS29Q9UBQ0 182 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 TAGLN3Q9UI15 199 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SNX6Q9UNH7 406 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 APC2O95996 2303 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 GNG14A0A1W2PPG7 69 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR2A25A4D2G3 310 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 LRIT2A6NDA9 550 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 B2RBV5 119 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 SGK494L7N484 410 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 CHEK2O96017 543 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 PGM1P36871 562 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZFP36L2P47974 494 aaKnown RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 TOR1AIP1Q5JTV8 583 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 ACAD11Q709F0 780 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 NAXDQ8IW45 347 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR4N5Q8IXE1 308 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF655Q8N720 491 aaPredicted RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 C19orf47Q8N9M1 422 aaKnown RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 CEP70Q8NHQ1 597 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 C1orf21Q9H246 121 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 WDR70Q9NW82 654 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 PILRAQ9UKJ1 303 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 FBXW2Q9UKT8 454 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 PPT2Q9UMR5 302 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 EXO1Q9UQ84 846 aaKnown RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 RUVBL1Q9Y265 456 aaKnown RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 PCDHGA11Q9Y5H2 935 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 ADAMTS20P59510 1910 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 A0A0A6YYC8 382 aaPredicted RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 IGHV5-10-1A0A0J9YXX1 117 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 A0A0J9YY10 115 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 I3L1I5 382 aaPredicted RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 NR5A2O00482 541 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 NVLO15381 856 aaKnown RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 NTRK1P04629 796 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 C8orf89P0DMQ9 161 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 HNRNPFP52597 415 aaKnown RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 PHC1P78364 1004 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 BTN3A2P78410 334 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 C16orf72Q14CZ0 275 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 TIGD2Q4W5G0 525 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 C18orf63Q68DL7 685 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 NOXRED1Q6NXP6 359 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 TRIM46Q7Z4K8 759 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 NET1Q7Z628 596 aaPredicted RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 SNX32Q86XE0 403 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 KLHDC8AQ8IYD2 350 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 LAS2Q8IYD9 372 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 RBM15BQ8NDT2 890 aaKnown RBP9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR9A4Q8NGU2 314 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 PROKR1Q8TCW9 393 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 CLPTM1LQ96KA5 538 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 CSF3RQ99062 836 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 EFCAB11Q9BUY7 163 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 PIF1Q9H611 641 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 TOR4AQ9NXH8 423 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 CSNK1G3Q9Y6M4 447 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 COL12A1Q99715 3063 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 BSNQ9UPA5 3926 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 ACACAQ13085 2346 aa9.06□□□□□ -0.96
HMGCLL1-206ENST00000428842 ASPDHA6ND91 283 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 TRPC5OSA6NMA1 111 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 TMEM150CB9EJG8 249 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 PCDHGA12O60330 932 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 GSNP06396 782 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 CKMT1AP12532 417 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 CAPN3P20807 821 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 ALAS2P22557 587 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 PAX7P23759 505 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 TPP2P29144 1249 aaPredicted RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR1D4P47884 311 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 ALDH9A1P49189 494 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 ST13P50502 369 aaKnown RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 INHBCP55103 352 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 MRPS35P82673 323 aaKnown RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLC25A3Q00325 362 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 KLF10Q13118 480 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 MUM1Q2TAK8 710 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 DNAL1Q4LDG9 190 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 CYP20A1Q6UW02 462 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 LRRC74BQ6ZQY2 392 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLCO6A1Q86UG4 719 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 TMEM52Q8NDY8 209 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 SIMC1Q8NDZ2 872 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 CIDECQ96AQ7 238 aaPredicted RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 CCDC74BQ96LY2 380 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 MS4A8Q9BY19 250 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 TMEM9BQ9NQ34 198 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 C1orf109Q9NX04 203 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 VTI1BQ9UEU0 232 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 TMCO1Q9UM00 188 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 GPR45Q9Y5Y3 372 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms