RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 PISDQ9UG56 409 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 SERTAD3Q9UJW9 196 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 PPT2Q9UMR5 302 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 TRIM33Q9UPN9 1127 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 EIF3LQ9Y262 564 aaKnown RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ARL2BPQ9Y2Y0 163 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 MRPS2Q9Y399 296 aaKnown RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 FAM186AA6NE01 2351 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 CCDC187A0A096LP49 1063 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 A0A0A6YYC8 382 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAM149AA5PLN7 773 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 C4orf51C9J302 202 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 I3L1I5 382 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 POLR1CO15160 346 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 EEDO75530 441 aaKnown RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 SCRG1O75711 98 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 KLHL18O94889 574 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 KCNK5O95279 499 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 TBX6O95947 436 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 B3GALT4O96024 378 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 KLK1P06870 262 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 ANXA4P09525 319 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 JMJD7P0C870 316 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRR35P0CG20 571 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 CCL4P13236 92 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 IDO1P14902 403 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 ALOX12P18054 663 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 IL1RNP18510 177 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 NCF2P19878 526 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 TIA1P31483 386 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 MAPK12P53778 367 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 MAPK10P53779 464 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 MTTPP55157 894 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 NME5P56597 212 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 STX1BP61266 288 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 HYAL2Q12891 473 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 HERC3Q15034 1050 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 RPS6KA2Q15349 733 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 MUM1Q2TAK8 710 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 RFTN2Q52LD8 501 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 C3orf38Q5JPI3 329 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 MANEAQ5SRI9 462 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 CCNYL2Q5T2Q4 361 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 OR4C11Q6IEV9 310 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 OGFOD2Q6N063 350 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 NOXRED1Q6NXP6 359 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 TLDC1Q6P9B6 456 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 ABHD17CQ6PCB6 329 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 CYP20A1Q6UW02 462 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 LARP4Q71RC2 724 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 RAB11FIP2Q7L804 512 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 SPATA19Q7Z5L4 167 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 UBE3DQ7Z6J8 389 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 PIGWQ7Z7B1 504 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 PPP1R3BQ86XI6 285 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 METTL4Q8N3J2 472 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 METTL27Q8N6F8 245 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 CLHC1Q8NHS4 586 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 UTP15Q8TED0 518 aaKnown RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 CHTF18Q8WVB6 975 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZNF501Q96CX3 271 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 LIN37Q96GY3 246 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 C10orf90Q96M02 699 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 TEFMQ96QE5 360 aaKnown RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 RTKNQ9BST9 563 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 TBCDQ9BTW9 1192 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 ROGDIQ9GZN7 287 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 AICDAQ9GZX7 198 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 ACTR5Q9H9F9 607 aaPredicted RBP7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 CUTCQ9NTM9 273 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 TXLNGQ9NUQ3 528 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 SLC39A1Q9NY26 324 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 HEY2Q9UBP5 337 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 NDOR1Q9UHB4 597 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 SRPK3Q9UPE1 567 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 DLGAP4Q9Y2H0 992 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 TMED5Q9Y3A6 229 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 SLC22A7Q9Y694 548 aa7.52□□□□□ -1.21
HMGA1P4-201ENST00000428643 ARID1BQ8NFD5 2236 aaPredicted RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 A0A0A6YYD5 115 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 A0A1B0GX78 115 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 DCDC2BA2VCK2 349 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PMS2P1A4D2B8 440 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 FITM1A5D6W6 292 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 B4E171 279 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 NPIPB8E9PQR5 432 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 SGK494L7N484 410 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 FCHO1O14526 889 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PLD2O14939 933 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZNF749O43361 778 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 B3GALT2O43825 422 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 CCDC22O60826 627 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 RDH16O75452 317 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 DCTN3O75935 186 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 DKK1O94907 266 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 TIAF1O95411 115 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ALDOCP09972 364 aaKnown RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 G6PDP11413 515 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 BCKDHAP12694 445 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 SDC1P18827 310 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms