RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 XKRXQ6PP77 449 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 NXPE4Q6UWF7 544 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 THOC6Q86W42 341 aaKnown RBP12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 ARMC10Q8N2F6 343 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 TBC1D19Q8N5T2 526 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 CREB3L4Q8TEY5 395 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 CFAP36Q96G28 342 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 MAGED4Q96JG8 741 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 PTCHD1Q96NR3 888 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 PELI2Q9HAT8 420 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 CHST11Q9NPF2 352 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 LRFN1Q9P244 771 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 CHMP2BQ9UQN3 213 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 PSAT1Q9Y617 370 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 TEX264Q9Y6I9 313 aa12.23□□□□□ -0.45
DEPDC7-203ENST00000427755 PABPN1LA6NDY0 278 aaKnown RBP12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 CDC7O00311 574 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 TP73O15350 636 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 ASNA1O43681 348 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 NME2P1O60361 137 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 NME2P22392 152 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 ELAVL4P26378 380 aaKnown RBP12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 TRHRP34981 398 aaPredicted RBP12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 PTGER4P35408 488 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 HNF4AP41235 474 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 NAA30Q147X3 362 aaPredicted RBP12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 MORF4L2Q15014 288 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 FGD2Q7Z6J4 655 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 TMPRSS11BQ86T26 416 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 ZC3HC1Q86WB0 502 aaKnown RBP12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 PDIK1LQ8N165 341 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 HORMAD2Q8N7B1 307 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 TRPV3Q8NET8 790 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 ANKRD7Q92527 254 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 TRIM8Q9BZR9 551 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 RUBCNLQ9H714 662 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 NECTIN3Q9NQS3 549 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 PRDM9Q9NQV7 894 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 SLC22A14Q9Y267 594 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 MEMO1Q9Y316 297 aa12.22□□□□□ -0.45
DEPDC7-203ENST00000427755 NPEPPSL1A6NEC2 478 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 C19orf84I3L1E1 186 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 ZNHIT1O43257 154 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 MLYCDO95822 493 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 SERPINA6P08185 405 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 ESRRAP11474 423 aaPredicted RBP12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 RNH1P13489 461 aaKnown RBP12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 POU3F2P20265 443 aaPredicted RBP12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 CYB561P49447 251 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 CDKL1Q00532 357 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 HSF1Q00613 529 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 ZNF460Q14592 562 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 MAPKAPK3Q16644 382 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 NCCRP1Q6ZVX7 275 aaPredicted RBP12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 CYP4X1Q8N118 509 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 CA13Q8N1Q1 262 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 CPSF7Q8N684 471 aaKnown RBP12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 FAM98AQ8NCA5 519 aaKnown RBP12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 APCDD1LQ8NCL9 501 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 LRRC39Q96DD0 335 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 AIF1LQ9BQI0 150 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 MCMBPQ9BTE3 642 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 MOCS1Q9NZB8 636 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 ZFATQ9P243 1243 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 DYRK1BQ9Y463 629 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 CLDN16Q9Y5I7 305 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 KCNE2Q9Y6J6 123 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 FBN2P35556 2912 aa12.21□□□□□ -0.45
DEPDC7-203ENST00000427755 LRBAP50851 2863 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 MYO7BQ6PIF6 2116 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 URADA6NGE7 173 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 ADAM10O14672 748 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 SNRPB2P08579 225 aaKnown RBP12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 COX6B1P14854 86 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 ZNF24P17028 368 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 TCP1P17987 556 aaKnown RBP12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 HLCSP50747 726 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 SMSP52788 366 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 ITGA8P53708 1063 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 TAS2R39P59534 338 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 RBBP5Q15291 538 aaKnown RBP12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 C18orf21Q32NC0 220 aaPredicted RBP12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 TOR1AIP1Q5JTV8 583 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 SLCO4C1Q6ZQN7 724 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 SYDE1Q6ZW31 735 aaPredicted RBP12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 GDF7Q7Z4P5 450 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 DOLPP1Q86YN1 238 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 SCUBE1Q8IWY4 988 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 KLHDC8AQ8IYD2 350 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 ZNF295-AS1Q8N0V1 137 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 GHDCQ8N2G8 530 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 NKAPQ8N5F7 415 aaKnown RBP12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 AGAP11Q8TF27 550 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 ANKRD49Q8WVL7 239 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 RHBGQ9H310 441 aa12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 ZNF223Q9UK11 482 aaPredicted RBP12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 PPIEQ9UNP9 301 aaKnown RBP12.2□□□□□ -0.46
DEPDC7-203ENST00000427755 OARD1Q9Y530 152 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms