RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 HERC2P3Q9BVR0 1158 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 EBF2Q9HAK2 575 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 ADAP2Q9NPF8 381 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 ALKBH4Q9NXW9 302 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 MAN2A2P49641 1150 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 DUS1LQ6P1R4 473 aaKnown RBP13.99□□□□□ -0.17
PTPN13-203ENST00000427191 VITQ6UXI7 678 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 BEND4Q6ZU67 534 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 HS3ST5Q8IZT8 346 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 OR2T33Q8NG76 320 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 ICKQ9UPZ9 632 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 ANKRD33BA6NCL7 494 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 C1orf196B1AJZ1 125 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 WDR53Q7Z5U6 358 aaPredicted RBP13.98□□□□□ -0.17
PTPN13-203ENST00000427191 PXKQ7Z7A4 578 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 NPAS3Q8IXF0 933 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 TBX5Q99593 518 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 SEC61A2Q9H9S3 476 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF175Q9Y473 711 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 DNMT3AQ9Y6K1 912 aaPredicted RBP13.98□□□□□ -0.17
PTPN13-203ENST00000427191 TRAPPC13A5PLN9 417 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 NEMP2A6NFY4 417 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 BCHEP06276 602 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 KLK3P07288 261 aaPredicted RBP13.98□□□□□ -0.17
PTPN13-203ENST00000427191 NEIL3Q8TAT5 605 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 KLHL21Q9UJP4 597 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 CREG1O75629 220 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 RGS9O75916 674 aaPredicted RBP13.98□□□□□ -0.17
PTPN13-203ENST00000427191 EBLN1P0CF75 366 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 NOGQ13253 232 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 LRRC32Q14392 662 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 TBRG1Q3YBR2 411 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 HGSNATQ68CP4 663 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 ISOC1Q96CN7 298 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 RPF2Q9H7B2 306 aaKnown RBP13.98□□□□□ -0.17
PTPN13-203ENST00000427191 DKKL1Q9UK85 242 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 PRKXP51817 358 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 HYLS1Q96M11 299 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 AKTIPQ9H8T0 292 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 FKBPLQ9UIM3 349 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 DHDHQ9UQ10 334 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 NEURL4Q96JN8 1562 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 GXYLT2A0PJZ3 443 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 SLC26A5P58743 744 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 MELKQ14680 651 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 CCDC71LQ8N9Z2 235 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 NSMAFQ92636 917 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 SLC28A3Q9HAS3 691 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF226Q9NYT6 803 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 LIPT1Q9Y234 373 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 ADAM18Q9Y3Q7 739 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 EDDM13A0A1B0GTR0 161 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 PIAS1O75925 651 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 UQCRC2P22695 453 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 GRIK2Q13002 908 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF423Q2M1K9 1284 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 GPRC6AQ5T6X5 926 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 PLPP4Q5VZY2 271 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 EPGNQ6UW88 154 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 FAM198BQ6UWH4 519 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF440Q8IYI8 595 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 OR7G2Q8NG99 324 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 TM9SF4Q92544 642 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 ITPKCQ96DU7 683 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 OR2AG1Q9H205 316 aa13.98□□□□□ -0.17
PTPN13-203ENST00000427191 IQCF5A8MTL0 148 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 AOC2O75106 756 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 FUT10Q6P4F1 479 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 FAM43BQ6ZT52 329 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-203ENST00000427191 SAMD12Q8N8I0 201 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 ERVK-19Q9WJR5 959 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 ASB4Q9Y574 426 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 PAK4O96013 591 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-203ENST00000427191 CARD16Q5EG05 197 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 HOXB13Q92826 284 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-203ENST00000427191 PEX13Q92968 403 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 HS6ST2Q96MM7 605 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 TAS2R9Q9NYW1 312 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 FTCDNL1E5RQL4 147 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF16P17020 682 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-203ENST00000427191 BNIP3Q12983 259 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 ATP6AP1Q15904 470 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 BEST3Q8N1M1 668 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 OR14A2Q96R54 314 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 MAGIXQ9H6Y5 334 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 SSX5O60225 188 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 HOXA10P31260 410 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-203ENST00000427191 CDKN2CP42773 168 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 DNASE1L3Q13609 305 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 C6orf183Q5T699 404 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 SLC27A4Q6P1M0 643 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 COMTD1Q86VU5 262 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 ACBD4Q8NC06 268 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 DPYSL5Q9BPU6 564 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 STRA6Q9BX79 667 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 SOBPA7XYQ1 873 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 CDC7O00311 574 aa13.97□□□□□ -0.17
PTPN13-203ENST00000427191 TLX2O43763 284 aaPredicted RBP13.97□□□□□ -0.17
PTPN13-203ENST00000427191 RPP14O95059 124 aaKnown RBP13.97□□□□□ -0.17
PTPN13-203ENST00000427191 PTGIRP43119 386 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms