RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PTPN4P29074 926 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 HPDP32754 393 aaPredicted RBP23.21■■□□□ 1.31
VEGFA-209ENST00000425836 WDR4P57081 412 aaKnown RBP23.21■■□□□ 1.31
VEGFA-209ENST00000425836 RPS13P62277 151 aaKnown RBP23.21■■□□□ 1.31
VEGFA-209ENST00000425836 RPS15P62841 145 aaKnown RBP23.21■■□□□ 1.31
VEGFA-209ENST00000425836 IFT88Q13099 833 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 OR2L5Q8NG80 312 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 METTL6Q8TCB7 284 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 FKBP10Q96AY3 582 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 TRMOQ9BU70 441 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 SLC29A3Q9BZD2 475 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 SHCBP1LQ9BZQ2 653 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 FAM117AQ9C073 453 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 OR51B5Q9H339 312 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 ELOVL6Q9H5J4 265 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 TNFRSF12AQ9NP84 129 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 SNX6Q9UNH7 406 aa23.21■■□□□ 1.31
VEGFA-209ENST00000425836 URB1O60287 2271 aaKnown RBP23.2■■□□□ 1.3
VEGFA-209ENST00000425836 ALBP02768 609 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 ENO1P06733 434 aaKnown RBP23.2■■□□□ 1.3
VEGFA-209ENST00000425836 PLA2G16P53816 162 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 PHEXP78562 749 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 MAT1AQ00266 395 aaKnown RBP23.2■■□□□ 1.3
VEGFA-209ENST00000425836 SGO1Q5FBB7 561 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 C10orf62Q5T681 223 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-209ENST00000425836 DEPDC1Q5TB30 811 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 HHATQ5VTY9 493 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 BROXQ5VW32 411 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 KHDRBS2Q5VWX1 349 aaKnown RBP23.2■■□□□ 1.3
VEGFA-209ENST00000425836 CHSY3Q70JA7 882 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 UBE3DQ7Z6J8 389 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 SLC45A3Q96JT2 553 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 PAIP2Q9BPZ3 127 aaKnown RBP23.2■■□□□ 1.3
VEGFA-209ENST00000425836 SLC26A1Q9H2B4 701 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 FARSBQ9NSD9 589 aaKnown RBP23.2■■□□□ 1.3
VEGFA-209ENST00000425836 PSD3Q9NYI0 1048 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 CTSFQ9UBX1 484 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 ACACAQ13085 2346 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 ACACBO00763 2458 aa23.2■■□□□ 1.3
VEGFA-209ENST00000425836 ZNF860A6NHJ4 632 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 HMGB1P1B2RPK0 211 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-209ENST00000425836 H3BQF6 201 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 RDH16O75452 317 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 KLF7O75840 302 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-209ENST00000425836 PTX3P26022 381 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-209ENST00000425836 RPS18P62269 152 aaKnown RBP23.19■■□□□ 1.3
VEGFA-209ENST00000425836 BTN3A2P78410 334 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 ST3GAL2Q16842 350 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 SYT16Q17RD7 645 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 TMEM35AQ53FP2 167 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 ARL13AQ5H913 290 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-209ENST00000425836 TCHHL1Q5QJ38 904 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-209ENST00000425836 FAM69BQ5VUD6 431 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 ABHD17CQ6PCB6 329 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 SHISA5Q8N114 240 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 MGARPQ8TDB4 240 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 KCNA7Q96RP8 456 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 ACTL8Q9H568 366 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 NKIRAS1Q9NYS0 192 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 TRPC4Q9UBN4 977 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 MAP4K5Q9Y4K4 846 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 TIMM22Q9Y584 194 aa23.19■■□□□ 1.3
VEGFA-209ENST00000425836 A0A0G2JN53 185 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 MANBAO00462 879 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 DNAJB6O75190 326 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 ETHE1O95571 254 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 PDYNP01213 254 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 FOXA1P55317 472 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 FOXL2P58012 376 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 CES4AQ5XG92 561 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 NIPAL1Q6NVV3 410 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 TRIM40Q6P9F5 258 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 SELENOMQ8WWX9 145 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 QRFPRQ96P65 431 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 ACBD3Q9H3P7 528 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 HCN3Q9P1Z3 774 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 ZNF282Q9UDV7 671 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-209ENST00000425836 TCFL5Q9UL49 500 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 PPT2Q9UMR5 302 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 IGLV3-12A0A075B6K2 115 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 VSTM2BA6NLU5 285 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 SAP18O00422 153 aaKnown RBP23.18■■□□□ 1.3
VEGFA-209ENST00000425836 KRT6AP02538 564 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 KRT6BP04259 564 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 CHRNGP07510 517 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 CD63P08962 238 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 HMOX2P30519 316 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 ARRB2P32121 409 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 SERPINB5P36952 375 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 KRT6CP48668 564 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 SKP1P63208 163 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 GALNT1Q10472 559 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-209ENST00000425836 RCN2Q14257 317 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 CHI3L2Q15782 390 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 NKG7Q16617 165 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 CCDC81Q6ZN84 652 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 ATG14Q6ZNE5 492 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 CUZD1Q86UP6 607 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 TMEM151BQ8IW70 566 aa23.18■■□□□ 1.3
VEGFA-209ENST00000425836 SRFBP1Q8NEF9 429 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms