RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 MS4A6EQ96DS6 147 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 NUDT4Q9NZJ9 180 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 MTRF1LQ9UGC7 380 aaKnown RBP17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 VPS4AQ9UN37 437 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 FLNBO75369 2602 aaKnown RBP17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 MAGEB17A8MXT2 336 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 CLGNO14967 610 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 CCNT2O60583 730 aaKnown RBP17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 WFS1O76024 890 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 ACSL3O95573 720 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 ICAM2P13598 275 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 CASP2P42575 452 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 BTN3A2P78410 334 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 BTG2P78543 158 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 RUNX2Q13950 521 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 ABRAXAS2Q15018 415 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 NSDHLQ15738 373 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 PDK4Q16654 411 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 ADPRMQ3LIE5 342 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 PLAG1Q6DJT9 500 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 KRT78Q8N1N4 520 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 CA13Q8N1Q1 262 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 SLC44A1Q8WWI5 657 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 HAS2Q92819 552 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 QRFPRQ96P65 431 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 FMO2Q99518 471 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 PITHD1Q9GZP4 211 aaPredicted RBP17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 RHBGQ9H310 441 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 EPS8L2Q9H6S3 715 aa17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 CLK4Q9HAZ1 481 aaKnown RBP17.25■□□□□ 0.35
SMARCAL1-205ENST00000425815 A0A087X1B8 175 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 A0A096LPK6 155 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 URADA6NGE7 173 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 KIF2AO00139 706 aaPredicted RBP17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 B4GALT2O60909 372 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 CLEC3AO75596 197 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 CBX6O95503 412 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 PHBP35232 272 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 PCDH1Q08174 1060 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 MRPL49Q13405 166 aaKnown RBP17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 TBCCQ15814 346 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 UAP1Q16222 522 aaPredicted RBP17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 SFT2D3Q587I9 215 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 XKR6Q5GH73 641 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 NIPAL1Q6NVV3 410 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 H3F3CQ6NXT2 135 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 PLD6Q8N2A8 252 aaKnown RBP17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 TTLQ8NG68 377 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 KIF18AQ8NI77 898 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 RHEBL1Q8TAI7 183 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 UBTD2Q8WUN7 234 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 PTCD3Q96EY7 689 aaKnown RBP17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 SEC16BQ96JE7 1060 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 TSPYL1Q9H0U9 437 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 C19orf25Q9UFG5 118 aaPredicted RBP17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 COPG1Q9Y678 874 aaKnown RBP17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 NUP210LQ5VU65 1888 aa17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 SETXQ7Z333 2677 aaKnown RBP17.24■□□□□ 0.35
SMARCAL1-205ENST00000425815 PRRC2CQ9Y520 2896 aaKnown RBP17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 A0A0G2JN53 185 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 SUPT3HB4E1H0 165 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 SUPT3HO75486 399 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 KLHL2O95198 593 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 GSTM2P28161 218 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 MAGEA12P43365 314 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 TSFMP43897 325 aaKnown RBP17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 STXBP1P61764 594 aaKnown RBP17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 CHIT1Q13231 466 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 ZNF169Q14929 603 aaPredicted RBP17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 ACAP2Q15057 778 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 BTBD16Q32M84 506 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 CEP128Q6ZU80 1094 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 LRRC70Q7Z2Q7 622 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 CCDC91Q7Z6B0 441 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 M1APQ8TC57 530 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 GAL3ST3Q96A11 431 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 ISL2Q96A47 359 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 CNDP1Q96KN2 507 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 NPAS2Q99743 824 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 NECTIN3Q9NQS3 549 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 ZNF358Q9NW07 568 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 MAP10Q9P2G4 905 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 SCN3AQ9NY46 2000 aa17.23■□□□□ 0.35
SMARCAL1-205ENST00000425815 DOCK10Q96BY6 2186 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 IGKV3D-11A0A0A0MRZ8 115 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 LRRC14BA6NHZ5 514 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 K7EPI3 171 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 ERI3O43414 337 aaKnown RBP17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 KLK8O60259 260 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 WDPCPO95876 746 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 F10P00742 488 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 S100BP04271 92 aaPredicted RBP17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 TYK2P29597 1187 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 TNFSF10P50591 281 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 SKP1P63208 163 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 IRF8Q02556 426 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 TLR1Q15399 786 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 FAM83EQ2M2I3 478 aa17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 EIF2S3LQ2VIR3 472 aaKnown RBP17.22■□□□□ 0.35
SMARCAL1-205ENST00000425815 ABHD17CQ6PCB6 329 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms