RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 MRGPRGQ86SM5 289 aa12□□□□□ -0.49
SGCE-203ENST00000425444 GPSM1Q86YR5 675 aa12□□□□□ -0.49
SGCE-203ENST00000425444 TCAIMQ8N3R3 496 aa12□□□□□ -0.49
SGCE-203ENST00000425444 ZNF740Q8NDX6 193 aa12□□□□□ -0.49
SGCE-203ENST00000425444 OR4K1Q8NGD4 311 aa12□□□□□ -0.49
SGCE-203ENST00000425444 FBF1Q8TES7 1133 aa12□□□□□ -0.49
SGCE-203ENST00000425444 EXT2Q93063 718 aa12□□□□□ -0.49
SGCE-203ENST00000425444 RELTQ969Z4 430 aa12□□□□□ -0.49
SGCE-203ENST00000425444 CNDP1Q96KN2 507 aa12□□□□□ -0.49
SGCE-203ENST00000425444 WDR77Q9BQA1 342 aaPredicted RBP12□□□□□ -0.49
SGCE-203ENST00000425444 SARGQ9BW04 601 aa12□□□□□ -0.49
SGCE-203ENST00000425444 SPNS1Q9H2V7 528 aa12□□□□□ -0.49
SGCE-203ENST00000425444 CNOT10Q9H9A5 744 aaKnown RBP12□□□□□ -0.49
SGCE-203ENST00000425444 SUCOQ9UBS9 1254 aaKnown RBP12□□□□□ -0.49
SGCE-203ENST00000425444 ZFP69BQ9UJL9 534 aa12□□□□□ -0.49
SGCE-203ENST00000425444 SLC22A7Q9Y694 548 aa12□□□□□ -0.49
SGCE-203ENST00000425444 PRRC2AP48634 2157 aaKnown RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 URADA6NGE7 173 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 CDC123O75794 336 aaPredicted RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 FAM155BO75949 473 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 PRR35P0CG20 571 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 ZNF888P0CJ79 500 aaPredicted RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 CD1DP15813 335 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 ALOX12P18054 663 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 GNAZP19086 355 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 PHBP35232 272 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 AHRP35869 848 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 HNF4AP41235 474 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 GDF5P43026 501 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 SCTRP47872 440 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 CDC16Q13042 620 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 EFTUD2Q15029 972 aaKnown RBP eCLIP11.99□□□□□ -0.49
SGCE-203ENST00000425444 PCOLCEQ15113 449 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 ZKSCAN8Q15776 578 aaPredicted RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 UAP1Q16222 522 aaPredicted RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 C18orf21Q32NC0 220 aaPredicted RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 DEFB134Q4QY38 66 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 ISLR2Q6UXK2 745 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 CMC1Q7Z7K0 106 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 TBC1D1Q86TI0 1168 aaPredicted RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 PDSS2Q86YH6 399 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 TRPV3Q8NET8 790 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 NT5CQ8TCD5 201 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 BRIX1Q8TDN6 353 aaKnown RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 PPP4R1Q8TF05 950 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 RHBDF1Q96CC6 855 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 MRRFQ96E11 262 aaKnown RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 PEX11GQ96HA9 241 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 VN1R1Q9GZP7 353 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 PRM3Q9NNZ6 103 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 CD274Q9NZQ7 290 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 MTRF1LQ9UGC7 380 aaKnown RBP11.99□□□□□ -0.49
SGCE-203ENST00000425444 RNF112Q9ULX5 631 aa11.99□□□□□ -0.49
SGCE-203ENST00000425444 ATRQ13535 2644 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 GALR3O60755 368 aaPredicted RBP11.98□□□□□ -0.49
SGCE-203ENST00000425444 H2AFYO75367 372 aaKnown RBP11.98□□□□□ -0.49
SGCE-203ENST00000425444 WFS1O76024 890 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 SEC24DO94855 1032 aaPredicted RBP11.98□□□□□ -0.49
SGCE-203ENST00000425444 WISP3O95389 354 aaPredicted RBP11.98□□□□□ -0.49
SGCE-203ENST00000425444 C1QAP02745 245 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 SERPINA7P05543 415 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 CYC1P08574 325 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 CD99P14209 185 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 CRABP2P29373 138 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 SLC6A12P48065 614 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 HSPA7P48741 367 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 RAB8AP61006 207 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 AP2B1P63010 937 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 OLR1P78380 273 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 SLBPQ14493 270 aaKnown RBP eCLIP11.98□□□□□ -0.49
SGCE-203ENST00000425444 OR4D1Q15615 310 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 FBXO48Q5FWF7 155 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 NIPAL1Q6NVV3 410 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 TMEM205Q6UW68 189 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 CEP128Q6ZU80 1094 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 LANCL3Q6ZV70 420 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 ZNF808Q8N4W9 903 aaPredicted RBP11.98□□□□□ -0.49
SGCE-203ENST00000425444 AFAP1L2Q8N4X5 818 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 SIRT6Q8N6T7 355 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 SNX31Q8N9S9 440 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 ANKRD53Q8N9V6 530 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 MNS1Q8NEH6 495 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 OR5T3Q8NGG3 340 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 DNAJB14Q8TBM8 379 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 NANOS1Q8WY41 292 aaKnown RBP11.98□□□□□ -0.49
SGCE-203ENST00000425444 CCT6BQ92526 530 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 TMEM79Q9BSE2 394 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 TUBB6Q9BUF5 446 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 CAPS2Q9BXY5 557 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 ZNF700Q9H0M5 742 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 DNAJC11Q9NVH1 559 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 GPRC5BQ9NZH0 403 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 PTGFRNQ9P2B2 879 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 CSAG2Q9Y5P2 127 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 DOCK10Q96BY6 2186 aa11.98□□□□□ -0.49
SGCE-203ENST00000425444 RTTNQ86VV8 2226 aa11.97□□□□□ -0.49
SGCE-203ENST00000425444 LOC102723996A0A087X1L8 192 aa11.97□□□□□ -0.49
SGCE-203ENST00000425444 IGHV3-20A0A0C4DH32 117 aa11.97□□□□□ -0.49
SGCE-203ENST00000425444 A0A1W2PQ72 361 aa11.97□□□□□ -0.49
SGCE-203ENST00000425444 DYTNA2CJ06 578 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms