RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 KLHL25Q9H0H3 589 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 ZNF385DQ9H6B1 395 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 DDX31Q9H8H2 851 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 EFCAB1Q9HAE3 211 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 CLK4Q9HAZ1 481 aaKnown RBP9.85□□□□□ -0.83
MDC1-205ENST00000425072 FANCEQ9HB96 536 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 TXLNGQ9NUQ3 528 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 SOHLH2Q9NX45 425 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 ARMCX1Q9P291 453 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 KLHL3Q9UH77 587 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 TAGLN3Q9UI15 199 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 SLC22A7Q9Y694 548 aa9.85□□□□□ -0.83
MDC1-205ENST00000425072 CROCCQ5TZA2 2017 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 LOC100653049A0A140TA62 436 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 FAM234BA2RU67 622 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 C2orf72A6NCS6 295 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 KIF1CO43896 1103 aaKnown RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 SH3BP5O60239 455 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 PCDH7O60245 1069 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 SH3BGRLO75368 114 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 KRT34O76011 436 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 UBOX5O94941 541 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 ETHE1O95571 254 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 KLK1P06870 262 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 ANKRD34CP0C6C1 535 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 SMIM10L1P0DMW3 83 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 HOXB3P14651 431 aaPredicted RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 NELFEP18615 380 aaKnown RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 JAK1P23458 1154 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 PIK3R1P27986 724 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 TIA1P31483 386 aaKnown RBP eCLIP9.84□□□□□ -0.83
MDC1-205ENST00000425072 MLLT3P42568 568 aaPredicted RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 POLR2JP52435 117 aaKnown RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 GFERP55789 205 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 KCNK10P57789 538 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 VSX2P58304 361 aaPredicted RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 PPP1CAP62136 330 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 ACY1Q03154 408 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 CFHR1Q03591 330 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 CYP4F3Q08477 520 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 BNIP1Q12981 228 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 UBAP2LQ14157 1087 aaKnown RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 SPIDRQ14159 915 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 GRM7Q14831 915 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 HEPACAMQ14CZ8 416 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 DPY19L1Q2PZI1 675 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 MMEL1Q495T6 779 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 LACTB2Q53H82 288 aaPredicted RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 TOR1AIP1Q5JTV8 583 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 SNAP47Q5SQN1 464 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 WASHC2DQ5SRD0 308 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 YOD1Q5VVQ6 348 aaPredicted RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 TLDC1Q6P9B6 456 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 ABHD17CQ6PCB6 329 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 COMMD6Q7Z4G1 85 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 NUDT13Q86X67 352 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 NAXDQ8IW45 347 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 GPR135Q8IZ08 494 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 TMEM132CQ8N3T6 1108 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 CSNK1A1LQ8N752 337 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 PCYOX1LQ8NBM8 494 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 VPS37AQ8NEZ2 397 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 PROKR1Q8TCW9 393 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 MTERF3Q96E29 417 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 SMIM10Q96HG1 83 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 SLC41A2Q96JW4 573 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 PPM1MQ96MI6 270 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 TMEM74Q96NL1 305 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 C1orf50Q9BV19 199 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 ZNF768Q9H5H4 540 aaKnown RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 COPS7BQ9H9Q2 264 aaPredicted RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 FAM60AQ9NP50 221 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 PRDM7Q9NQW5 492 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 MS4A12Q9NXJ0 267 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 CCDC167Q9P0B6 97 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 AKAP7Q9P0M2 348 aaPredicted RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 GIMAP2Q9UG22 337 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 BTBD3Q9Y2F9 522 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 NDUFAF1Q9Y375 327 aa9.84□□□□□ -0.83
MDC1-205ENST00000425072 ASCC3Q8N3C0 2202 aaKnown RBP9.84□□□□□ -0.83
MDC1-205ENST00000425072 VPS13AQ96RL7 3174 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 PCNX2A6NKB5 2137 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 LOC105369274A0A096LPK9 316 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 LOC102723532A0A0G2JNH3 316 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 A0A1W2PQM1 296 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 A8MU76 341 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 SAP18O00422 153 aaKnown RBP9.83□□□□□ -0.84
MDC1-205ENST00000425072 NTN3O00634 580 aaPredicted RBP9.83□□□□□ -0.84
MDC1-205ENST00000425072 PLPP1O14494 284 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 CFLARO15519 480 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 ERI3O43414 337 aaKnown RBP9.83□□□□□ -0.84
MDC1-205ENST00000425072 PRAMEF10O60809 474 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 TBX6O95947 436 aaPredicted RBP9.83□□□□□ -0.84
MDC1-205ENST00000425072 NPPAP01160 153 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 COX4I1P13073 169 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 DRD2P14416 443 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 ALOX12P18054 663 aa9.83□□□□□ -0.84
MDC1-205ENST00000425072 HIST1H1TP22492 207 aaPredicted RBP9.83□□□□□ -0.84
MDC1-205ENST00000425072 ATP5A1P25705 553 aaKnown RBP9.83□□□□□ -0.84
MDC1-205ENST00000425072 TLX1P31314 330 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms