RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 LSM4Q9Y4Z0 139 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 NME7Q9Y5B8 376 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 EVC2Q86UK5 1308 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TRAV26-1A0A087WT03 109 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ESYT2A0FGR8 921 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TYW5A2RUC4 315 aaKnown RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CCDC162PA2VCL2 907 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM8BA6NDV4 472 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM221A6NGB7 291 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PPIAL4DF5H284 164 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 F5H697 171 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 H0YIG0 161 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 SPRY2O43597 315 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PEX1O43933 1283 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 BCAS1O75363 584 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CLN5O75503 358 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CNTN5O94779 1100 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 MYO1DO94832 1006 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 UFL1O94874 794 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ACSL3O95573 720 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 MBP02144 154 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PROS1P07225 676 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CA3P07451 260 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 SERPINF2P08697 491 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CLTAP09496 248 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ANKRD34CP0C6C1 535 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CDK4P11802 303 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CREB1P16220 341 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 UBA1P22314 1058 aaKnown RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PPP2R1AP30153 589 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 AXLP30530 894 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 GKP32189 559 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CYP2C18P33260 490 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 FDFT1P37268 417 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 GPR4P46093 362 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 BCAP31P51572 246 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 MTCP1P56278 107 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 B2MP61769 119 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TSPAN5P62079 268 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 RAE1P78406 368 aaKnown RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 XIAPP98170 497 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 NHLH1Q02575 133 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 FGL1Q08830 312 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 DMWDQ09019 674 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 SLAQ13239 276 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 GK2Q14410 553 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 HLXQ14774 488 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TXNRD1Q16881 649 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 LY6KQ17RY6 165 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 RGS21Q2M5E4 152 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 SGSM1Q2NKQ1 1148 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TEX44Q53QW1 395 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PCID2Q5JVF3 399 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CTSL3PQ5NE16 218 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 C20orf194Q5TEA3 1177 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ATF7IP2Q5U623 682 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 LRRC8EQ6NSJ5 796 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TTC23LQ6PF05 361 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF474Q6S9Z5 364 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CBLN3Q6UW01 205 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PRSS55Q6UWB4 352 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF852Q6ZMS4 543 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 DPPA4Q7L190 304 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 SSX9Q7RTT3 188 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TMPRSS9Q7Z410 1059 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ERASQ7Z444 233 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CLNKQ7Z7G1 428 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 CCDC190Q86UF4 302 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ZC3HC1Q86WB0 502 aaKnown RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 STHQ8IWL8 128 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 MICU2Q8IYU8 434 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF683Q8IZ20 524 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ST13P4Q8IZP2 240 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 GALNT16Q8N428 558 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ANKFN1Q8N957 763 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 MCPH1Q8NEM0 835 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 NDNFQ8TB73 568 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 WDR20Q8TBZ3 569 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF596Q8TC21 504 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PNPT1Q8TCS8 783 aaKnown RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 AKAP1Q92667 903 aaKnown RBP eCLIP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 KIFAP3Q92845 792 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 OSTF1Q92882 214 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 RAB1CQ92928 201 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 FAM136AQ96C01 138 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 COQ2Q96H96 371 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 LRR1Q96L50 414 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 FOXN4Q96NZ1 517 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 VPS35Q96QK1 796 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PANX1Q96RD7 426 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 RAB40CQ96S21 281 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 TSG101Q99816 390 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 PIGMQ9H3S5 423 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 SMYD3Q9H7B4 428 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 GEMIN7Q9H840 131 aaKnown RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 LRRC4Q9HBW1 653 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 FLRT1Q9NZU1 646 aa3.5□□□□□ -1.85
SF3B1-205ENST00000424674 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-205ENST00000424674 SLC17A6Q9P2U8 582 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms