RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 SNX18Q96RF0 628 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 NUDCD1Q96RS6 583 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 PCDHB18PQ96TA0 734 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 MGME1Q9BQP7 344 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 C11orf70Q9BRQ4 267 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 CNPY3Q9BT09 278 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 ULBP3Q9BZM4 244 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 ABCG8Q9H221 673 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 GANQ9H2C0 597 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 NDST4Q9H3R1 872 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 DEF6Q9H4E7 631 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 SMYD2Q9NRG4 433 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 NSMCE4AQ9NXX6 385 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 VPS18Q9P253 973 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 MGAT4CQ9UBM8 478 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 EPHA6Q9UF33 1036 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 TBC1D29Q9UFV1 150 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 ERRFI1Q9UJM3 462 aaPredicted RBP4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 AMFRQ9UKV5 643 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 PADI1Q9ULC6 663 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 TSC22D4Q9Y3Q8 395 aa4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 COPG1Q9Y678 874 aaKnown RBP4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 MAP1AP78559 2803 aaPredicted RBP4.49□□□□□ -1.69
CDC42EP3-202ENST00000422687 GOLGA6L10A0A0M3HER8 536 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 FAM170AA1A519 330 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 GOLGA6L4A6NEF3 574 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SH2D7A6NKC9 451 aaPredicted RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 OR5K4A6NMS3 321 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 A8MX80 341 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 MATN3O15232 486 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 INPP4BO15327 924 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SPAG6O75602 509 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 KIAA0754O94854 1291 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 PGLSO95336 258 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 CBX6O95503 412 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 MT-ND3P03897 115 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ALDOAP04075 364 aaKnown RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 CLEC3BP05452 202 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 CALB1P05937 261 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 CHRM2P08172 466 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 CYP2A6P11509 494 aaPredicted RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 PEPDP12955 493 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 F3P13726 295 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SLC2A4P14672 509 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ZFXP17010 805 aaPredicted RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ZNF37AP17032 561 aaPredicted RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ERCC2P18074 760 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 NFKBIAP25963 317 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 HSPA9P38646 679 aaKnown RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 GPR1P46091 355 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 MTIF2P46199 727 aaKnown RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 HCAR3P49019 387 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 STC1P52823 247 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 DRG2P55039 364 aaKnown RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 GFERP55789 205 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 TPI1P60174 286 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 RPL7AP62424 266 aaKnown RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 RPP30P78346 268 aaKnown RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 OGDHQ02218 1023 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SLC10A7Q0GE19 358 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 TRAF2Q12933 501 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 NFATC2Q13469 925 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 DPYSQ14117 519 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 IHHQ14623 411 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SEC23BQ15437 767 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 CA9Q16790 459 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 EIF2S3LQ2VIR3 472 aaKnown RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 PRR30Q53SZ7 412 aaPredicted RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ABHD17BQ5VST6 288 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ZNF585AQ6P3V2 769 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 TMEM26Q6ZUK4 368 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 MON1BQ7L1V2 547 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SYVN1Q86TM6 617 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SLC9B2Q86UD5 537 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 TSPAN33Q86UF1 283 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 GALNT13Q8IUC8 556 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 PSTKQ8IV42 348 aaKnown RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 LAS2Q8IYD9 372 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SLC34A3Q8N130 599 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ARFGAP1Q8N6T3 406 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 RBMXL3Q8N7X1 1067 aaKnown RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 EXD1Q8NHP7 514 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 CT55Q8WUE5 264 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 AP2M1Q96CW1 435 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ELP4Q96EB1 424 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SLC41A2Q96JW4 573 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 PLEKHG4BQ96PX9 1271 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 LYSMD1Q96S90 227 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 AGAP2Q99490 1192 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 TUBGCP2Q9BSJ2 902 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ELOVL1Q9BW60 279 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 CINPQ9BW66 212 aaPredicted RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 TBC1D10AQ9BXI6 508 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 FSD1LQ9BXM9 530 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 RAB33BQ9H082 229 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 ACTL8Q9H568 366 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SUDS3Q9H7L9 328 aaPredicted RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SEMA4BQ9NPR2 832 aaPredicted RBP4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 LHX9Q9NQ69 397 aa4.48□□□□□ -1.69
CDC42EP3-202ENST00000422687 SNX15Q9NRS6 342 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms