RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PTRH2Q9Y3E5 179 aaKnown RBP4.67□□□□□ -1.66
SFXN1-202ENST00000421887 SPTBP11277 2137 aa4.67□□□□□ -1.66
SFXN1-202ENST00000421887 SEC16AO15027 2179 aa4.67□□□□□ -1.66
SFXN1-202ENST00000421887 HCFC1P51610 2035 aa4.67□□□□□ -1.66
SFXN1-202ENST00000421887 INTS1Q8N201 2190 aaKnown RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 TLCD2A6NGC4 264 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 RNF212BA8MTL3 300 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 AGPSO00116 658 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 SGTAO43765 313 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 KLRC4O43908 158 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 HEXIM1O94992 359 aaKnown RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 RASAL1O95294 804 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ZBTB11O95625 1053 aaPredicted RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 MLYCDO95822 493 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ATP1A1P05023 1023 aaKnown RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 HSP90AA1P07900 732 aaKnown RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 HBQ1P09105 142 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 KITP10721 976 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 GM2AP17900 193 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 KRT9P35527 623 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 CSNK1DP48730 415 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 FMO5P49326 533 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 TDGF1P3P51864 188 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ZNF135P52742 658 aaPredicted RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 NKX6-1P78426 367 aaPredicted RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 DMPKQ09013 629 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 GPR18Q14330 331 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 CYTH1Q15438 398 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 CNGA3Q16281 694 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 INSCQ1MX18 579 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 PTCHD3Q3KNS1 767 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 PARP15Q460N3 678 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 LCN10Q6JVE6 187 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ISLR2Q6UXK2 745 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 B4GALNT4Q76KP1 1039 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 HSD11B1LQ7Z5J1 315 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 NLRP14Q86W24 1093 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 DNAAF3Q8N9W5 541 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ZNF527Q8NB42 609 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 SLC38A9Q8NBW4 561 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ZNF397Q8NF99 534 aaPredicted RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 SUN3Q8TAQ9 357 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 N4BP2L2Q92802 583 aaPredicted RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 PTERQ96BW5 349 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 SDCCAG3Q96C92 435 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ECHDC3Q96DC8 303 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ARSGQ96EG1 525 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 RMND5BQ96G75 393 aaPredicted RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 PAGE5Q96GU1 130 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 TMEM41AQ96HV5 264 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 VPS50Q96JG6 964 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ZNF396Q96N95 335 aaPredicted RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 MAP3K3Q99759 626 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 CNPPD1Q9BV87 410 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 FAM234AQ9H0X4 552 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 PDCL3Q9H2J4 239 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 SEPT11Q9NVA2 429 aaKnown RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 PNPOQ9NVS9 261 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 EPHA6Q9UF33 1036 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 ARMCX3Q9UH62 379 aaPredicted RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 FEZ2Q9UHY8 353 aaPredicted RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 TINAGQ9UJW2 476 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 SERTAD3Q9UJW9 196 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 PCDHA3Q9Y5H8 950 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 FN1P02751 2386 aaKnown RBP4.66□□□□□ -1.66
SFXN1-202ENST00000421887 GTF3C1Q12789 2109 aa4.66□□□□□ -1.66
SFXN1-202ENST00000421887 JMJD1CQ15652 2540 aa4.65□□□□□ -1.66
SFXN1-202ENST00000421887 TRAV17A0A0B4J275 112 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 SLC9B1P1A6NJY1 282 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 ISM1B1AKI9 464 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 TMEM150CB9EJG8 249 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 E7EQ34 232 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 APOL1O14791 398 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 ME1P48163 572 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 AP1S1P61966 158 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 UBE2IP63279 158 aaKnown RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 FKBP3Q00688 224 aaKnown RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 NSUN2Q08J23 767 aaKnown RBP eCLIP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 PMS2P11Q13670 270 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 DAG1Q14118 895 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 HABP2Q14520 560 aaPredicted RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 CDO1Q16878 200 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 KHDC1Q4VXA5 237 aaKnown RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 TDRD12Q587J7 1177 aaKnown RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 OTUD1Q5VV17 481 aaPredicted RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF324BQ6AW86 544 aaPredicted RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 PLEKHA7Q6IQ23 1121 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 HIBCHQ6NVY1 386 aaPredicted RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 FAM198BQ6UWH4 519 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 IGFL2Q6UWQ7 119 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF813Q6ZN06 617 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 LINC00696Q6ZRV3 163 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 COLCA1Q6ZS62 124 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 CAMKMTQ7Z624 323 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 PDSS2Q86YH6 399 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 RTL3Q8N8U3 475 aaKnown RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 LINC00301Q8NCQ3 95 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 CATSPER1Q8NEC5 780 aa4.65□□□□□ -1.67
SFXN1-202ENST00000421887 PPHLN1Q8NEY8 458 aaKnown RBP4.65□□□□□ -1.67
SFXN1-202ENST00000421887 GOT1L1Q8NHS2 421 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms