RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 OR4K3Q96R72 315 aa15.77■□□□□ 0.12
UPF3AP3-201ENST00000420996 NDNQ99608 321 aa15.77■□□□□ 0.12
UPF3AP3-201ENST00000420996 DEFB126Q9BYW3 111 aa15.77■□□□□ 0.12
UPF3AP3-201ENST00000420996 PRDM9Q9NQV7 894 aa15.77■□□□□ 0.12
UPF3AP3-201ENST00000420996 IARS2Q9NSE4 1012 aaKnown RBP15.77■□□□□ 0.12
UPF3AP3-201ENST00000420996 NEU2Q9Y3R4 380 aa15.77■□□□□ 0.12
UPF3AP3-201ENST00000420996 IGKV3D-11A0A0A0MRZ8 115 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 TCRBV16S1A1N1A0A5B0 115 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 TPOP07202 933 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 ZNF888P0CJ79 500 aaPredicted RBP15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 RNH1P13489 461 aaKnown RBP15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 IGFBP2P18065 325 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 CXCR5P32302 372 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 AHRP35869 848 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 TTC27Q6P3X3 843 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 ZNF662Q6ZS27 426 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 CD163Q86VB7 1156 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 MARVELD2Q8N4S9 558 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 C2CD4AQ8NCU7 369 aaPredicted RBP15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 LILRB4Q8NHJ6 448 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 UTP15Q8TED0 518 aaKnown RBP15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 LINGO1Q96FE5 620 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 ARL15Q9NXU5 204 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 ZFP69BQ9UJL9 534 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 HRH3Q9Y5N1 445 aa15.76■□□□□ 0.11
UPF3AP3-201ENST00000420996 PABPN1LA6NDY0 278 aaKnown RBP15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 URADA6NGE7 173 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 FOXO6A8MYZ6 492 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 PEX1O43933 1283 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 TFEBP19484 476 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 MAOAP21397 527 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 SCTRP47872 440 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 AP1S2P56377 157 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 CMPK2Q5EBM0 449 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 CATSPEREQ5SY80 951 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 CEP128Q6ZU80 1094 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 ZFP62Q8NB50 900 aaPredicted RBP15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 ARMC2Q8NEN0 867 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 GABPB2Q8TAK5 448 aaPredicted RBP15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 MAGOHBQ96A72 148 aaKnown RBP15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 FBXL8Q96CD0 374 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 TRIM54Q9BYV2 358 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 LZTFL1Q9NQ48 299 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 NECTIN3Q9NQS3 549 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 PLSCR2Q9NRY7 297 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 ZFATQ9P243 1243 aa15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 PHF3Q92576 2039 aaKnown RBP15.75■□□□□ 0.11
UPF3AP3-201ENST00000420996 USP27XA6NNY8 438 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 A8MUA0 341 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 PSMD12O00232 456 aaPredicted RBP15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 HS6ST1O60243 411 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 CDC40O60508 579 aaKnown RBP eCLIP15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 SMIM10L1P0DMW3 83 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 CD1EP15812 388 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 GABRB3P28472 473 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 CHRNB4P30926 498 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 RFC3P40938 356 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 CDKN2DP55273 166 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 IL2P60568 153 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 CSHL1Q14406 222 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 KIAA0408Q6ZU52 694 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 CYP4Z2PQ8N1L4 340 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 TMEM156Q8N614 296 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 NAT8LQ8N9F0 302 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 APCDD1LQ8NCL9 501 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 TRPV3Q8NET8 790 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 B3GNT7Q8NFL0 401 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 TRIM58Q8NG06 486 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 SLC5A11Q8WWX8 675 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 ATL1Q8WXF7 558 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 RND1Q92730 232 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 NEIL2Q969S2 332 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 SMIM10Q96HG1 83 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 SLC6A16Q9GZN6 736 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 SPNS1Q9H2V7 528 aa15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 TP63Q9H3D4 680 aaPredicted RBP15.74■□□□□ 0.11
UPF3AP3-201ENST00000420996 INTS1Q8N201 2190 aaKnown RBP15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 SETD2Q9BYW2 2564 aaPredicted RBP15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 HNF4AP41235 474 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 CLCN2P51788 898 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 RAB8AP61006 207 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 TFF3Q07654 80 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 CRYMQ14894 314 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 TERF2Q15554 542 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 KRTAP21-3Q3LHN1 58 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 RBM20Q5T481 1227 aaKnown RBP15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 ARHGAP11AQ6P4F7 1023 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 ANKRD53Q8N9V6 530 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 RHBGQ9H310 441 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 KCNJ16Q9NPI9 418 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 NPDC1Q9NQX5 325 aaPredicted RBP15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 TNFRSF10DQ9UBN6 386 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 RNF6Q9Y252 685 aa15.73■□□□□ 0.11
UPF3AP3-201ENST00000420996 TRBV11-1A0A0K0K1C0 115 aa15.72■□□□□ 0.11
UPF3AP3-201ENST00000420996 GOLGA6L6A8MZA4 724 aa15.72■□□□□ 0.11
UPF3AP3-201ENST00000420996 ITGA10O75578 1167 aa15.72■□□□□ 0.11
UPF3AP3-201ENST00000420996 TOXO94900 526 aa15.72■□□□□ 0.11
UPF3AP3-201ENST00000420996 AHSGP02765 367 aa15.72■□□□□ 0.11
UPF3AP3-201ENST00000420996 PGAM1P18669 254 aa15.72■□□□□ 0.11
UPF3AP3-201ENST00000420996 GPR85P60893 370 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms