RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 BEST3Q8N1M1 668 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 HORMAD2Q8N7B1 307 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 TTLQ8NG68 377 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 SMIM10Q96HG1 83 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 SEC16BQ96JE7 1060 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 PTCHD1Q96NR3 888 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 SCN2AQ99250 2005 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 RBCK1Q9BYM8 510 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 CAB39LQ9H9S4 337 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 PSMD12O00232 456 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-208ENST00000417285 DNAJB6O75190 326 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 WDR47O94967 919 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 CCDC166P0CW27 439 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 C1GALT1C1LP0DN25 315 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 RNH1P13489 461 aaKnown RBP23.79■■□□□ 1.4
VEGFA-208ENST00000417285 COL8A1P27658 744 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 CD96P40200 585 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 SLC26A5P58743 744 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 GPX6P59796 221 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 CKAP4Q07065 602 aaKnown RBP23.79■■□□□ 1.4
VEGFA-208ENST00000417285 TUBA3CQ13748 450 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 TGFBIQ15582 683 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 ZRSR2Q15696 482 aaKnown RBP23.79■■□□□ 1.4
VEGFA-208ENST00000417285 CDKL4Q5MAI5 379 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 FCRLBQ6BAA4 426 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 TUBA3EQ6PEY2 450 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 QSOX2Q6ZRP7 698 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 CRLF3Q8IUI8 442 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 TCAIMQ8N3R3 496 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 FBXO25Q8TCJ0 367 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 TSLPQ969D9 159 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 RHBDF1Q96CC6 855 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 PITHD1Q9GZP4 211 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-208ENST00000417285 SEC14L3Q9UDX4 400 aa23.79■■□□□ 1.4
VEGFA-208ENST00000417285 PHGDHO43175 533 aaKnown RBP23.78■■□□□ 1.4
VEGFA-208ENST00000417285 GSTM2P28161 218 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 SPRP35270 261 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-208ENST00000417285 DCTP40126 519 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 HNF4AP41235 474 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 SLC6A12P48065 614 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 KCNK10P57789 538 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 RAB8AP61006 207 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 STXBP1P61764 594 aaKnown RBP23.78■■□□□ 1.4
VEGFA-208ENST00000417285 OLR1P78380 273 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 HYAL2Q12891 473 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 GRTP1Q5TC63 336 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 SLC34A3Q8N130 599 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 ARMC2Q8NEN0 867 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 ELP5Q8TE02 316 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 CREB3L4Q8TEY5 395 aa23.78■■□□□ 1.4
VEGFA-208ENST00000417285 UNKQ9C0B0 810 aaKnown RBP23.78■■□□□ 1.4
VEGFA-208ENST00000417285 MYO9AB2RTY4 2548 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 NCF1BA6NI72 391 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-208ENST00000417285 NCF1CA8MVU1 366 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-208ENST00000417285 UNC5CO95185 931 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 B3GALT4O96024 378 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 NCF1P14598 390 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-208ENST00000417285 CD46P15529 392 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 HPDP32754 393 aaPredicted RBP23.77■■□□□ 1.4
VEGFA-208ENST00000417285 STX2P32856 288 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 MAGEA4P43358 317 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 ATP6V0D1P61421 351 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 RBPJQ06330 500 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 TMIGD1Q6UXZ0 262 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 SLCO4C1Q6ZQN7 724 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 FJX1Q86VR8 437 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 RPS19BP1Q86WX3 136 aaKnown RBP23.77■■□□□ 1.4
VEGFA-208ENST00000417285 GPSM1Q86YR5 675 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 KRT78Q8N1N4 520 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 MDS2Q8NDY4 140 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 FAR2Q96K12 515 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 NT5DC2Q9H857 520 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 CNOT10Q9H9A5 744 aaKnown RBP23.77■■□□□ 1.4
VEGFA-208ENST00000417285 PRDM9Q9NQV7 894 aa23.77■■□□□ 1.4
VEGFA-208ENST00000417285 MLYCDO95822 493 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 MST1P26927 711 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 GGT5P36269 586 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 GDF5P43026 501 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 RAB10P61026 200 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 OR1C1Q15619 314 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 ZKSCAN8Q15776 578 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-208ENST00000417285 KBTBD12Q3ZCT8 623 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 TOR1AIP1Q5JTV8 583 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 ZNF787Q6DD87 383 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 ZDHHC24Q6UX98 284 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 CYP4X1Q8N118 509 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 SPATA6LQ8N4H0 392 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 TMEM178AQ8NBL3 297 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 NPAS2Q99743 824 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 KLHL31Q9H511 634 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 WWOXQ9NZC7 414 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 GPRC5BQ9NZH0 403 aa23.76■■□□□ 1.39
VEGFA-208ENST00000417285 LRBAP50851 2863 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 NBPF19A0A087WUL8 3843 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 ZG16O60844 167 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 C1QAP02745 245 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 CD1DP15813 335 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 EEF1DP29692 281 aaKnown RBP23.75■■□□□ 1.39
VEGFA-208ENST00000417285 BTG2P78543 158 aa23.75■■□□□ 1.39
VEGFA-208ENST00000417285 NAB1Q13506 487 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms