RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PPP1R7Q15435 360 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 RNFT1Q5M7Z0 435 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 HECTD2Q5U5R9 776 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 QSOX2Q6ZRP7 698 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 ABHD13Q7L211 337 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 DOLPP1Q86YN1 238 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 GHDCQ8N2G8 530 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 GPATCH11Q8N954 259 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 ANKRD53Q8N9V6 530 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 NFAM1Q8NET5 270 aaPredicted RBP13.88□□□□□ -0.19
RPS28-201ENST00000417088 MTFMTQ96DP5 389 aaKnown RBP13.88□□□□□ -0.19
RPS28-201ENST00000417088 OLFM1Q99784 485 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 NAT9Q9BTE0 207 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 SLC6A16Q9GZN6 736 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 CLK4Q9HAZ1 481 aaKnown RBP13.88□□□□□ -0.19
RPS28-201ENST00000417088 VWA7Q9Y334 891 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 TACC2O95359 2948 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 TCRBV16S1A1N1A0A5B0 115 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 SAGE2PA6NJ88 616 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 NRDCO43847 1150 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 ENO2P09104 434 aaPredicted RBP13.87□□□□□ -0.19
RPS28-201ENST00000417088 SMIM10L1P0DMW3 83 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 ABOP16442 354 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 MAOAP21397 527 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 TRHRP34981 398 aaPredicted RBP13.87□□□□□ -0.19
RPS28-201ENST00000417088 CYB561P49447 251 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 REEP5Q00765 189 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 HYAL2Q12891 473 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 BBS9Q3SYG4 887 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 FAM45BPQ6NSW5 357 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 SBSNQ6UWP8 590 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 FGD2Q7Z6J4 655 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 CPSF7Q8N684 471 aaKnown RBP13.87□□□□□ -0.19
RPS28-201ENST00000417088 FAM45AQ8TCE6 357 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 AGAP11Q8TF27 550 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 PDLIM5Q96HC4 596 aaKnown RBP13.87□□□□□ -0.19
RPS28-201ENST00000417088 SMIM10Q96HG1 83 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 TSNARE1Q96NA8 513 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 OSBPL9Q96SU4 736 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 KLHL31Q9H511 634 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 PELI2Q9HAT8 420 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 GPAMQ9HCL2 828 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 NECTIN3Q9NQS3 549 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 ASIC3Q9UHC3 531 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 CORO1CQ9ULV4 474 aaPredicted RBP13.87□□□□□ -0.19
RPS28-201ENST00000417088 ASB1Q9Y576 335 aa13.87□□□□□ -0.19
RPS28-201ENST00000417088 GOLGA6L10A0A0M3HER8 536 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 URADA6NGE7 173 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 A8MUA0 341 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 C4orf51C9J302 202 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 ADAM10O14672 748 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 RNH1P13489 461 aaKnown RBP13.86□□□□□ -0.19
RPS28-201ENST00000417088 ZNF24P17028 368 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 HLCSP50747 726 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 ITGA8P53708 1063 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 RBBP5Q15291 538 aaKnown RBP13.86□□□□□ -0.19
RPS28-201ENST00000417088 PPP1R3AQ16821 1122 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 TRMT10BQ6PF06 316 aaKnown RBP13.86□□□□□ -0.19
RPS28-201ENST00000417088 NXPE4Q6UWF7 544 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 THOC6Q86W42 341 aaKnown RBP13.86□□□□□ -0.19
RPS28-201ENST00000417088 ARMC10Q8N2F6 343 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 TRPV3Q8NET8 790 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 CREB3L4Q8TEY5 395 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 PHF10Q8WUB8 498 aaKnown RBP13.86□□□□□ -0.19
RPS28-201ENST00000417088 DMRTA2Q96SC8 542 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 AIF1LQ9BQI0 150 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 AICDAQ9GZX7 198 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 RHBGQ9H310 441 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 PPANQ9NQ55 473 aaKnown RBP13.86□□□□□ -0.19
RPS28-201ENST00000417088 PRDM9Q9NQV7 894 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 ZFATQ9P243 1243 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 DYRK1BQ9Y463 629 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 ANKRD17O75179 2603 aaKnown RBP13.86□□□□□ -0.19
RPS28-201ENST00000417088 ADGRG4Q8IZF6 3080 aa13.86□□□□□ -0.19
RPS28-201ENST00000417088 E9PLN8 166 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 PSMD12O00232 456 aaPredicted RBP13.85□□□□□ -0.19
RPS28-201ENST00000417088 IVDP26440 423 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 PTGER1P34995 402 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 ELK3P41970 407 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 TOR1AIP1Q5JTV8 583 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 HP1BP3Q5SSJ5 553 aaPredicted RBP13.85□□□□□ -0.19
RPS28-201ENST00000417088 C3P1Q6ZMU1 363 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 TMPRSS11BQ86T26 416 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 CA13Q8N1Q1 262 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 SLC35F6Q8N357 371 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 APCDD1LQ8NCL9 501 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 TMEM125Q96AQ2 219 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 CFAP36Q96G28 342 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 PWWP2AQ96N64 755 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 VKORC1Q9BQB6 163 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 WDR83Q9BRX9 315 aaKnown RBP13.85□□□□□ -0.19
RPS28-201ENST00000417088 DEFB126Q9BYW3 111 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 DDX47Q9H0S4 455 aaKnown RBP13.85□□□□□ -0.19
RPS28-201ENST00000417088 CHMP2BQ9UQN3 213 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 SLC22A14Q9Y267 594 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 KCNE2Q9Y6J6 123 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 AKAP9Q99996 3911 aa13.85□□□□□ -0.19
RPS28-201ENST00000417088 CDC7O00311 574 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 FCHO1O14526 889 aa13.84□□□□□ -0.19
RPS28-201ENST00000417088 PRRG2O14669 202 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms