RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 NME2P22392 152 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 ELK3P41970 407 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 MLF1P58340 268 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 RBBP5Q15291 538 aaKnown RBP13.52□□□□□ -0.25
PAF1-202ENST00000416728 HP1BP3Q5SSJ5 553 aaPredicted RBP13.52□□□□□ -0.25
PAF1-202ENST00000416728 ZNF468Q5VIY5 522 aaPredicted RBP13.52□□□□□ -0.25
PAF1-202ENST00000416728 TRMT10BQ6PF06 316 aaKnown RBP13.52□□□□□ -0.25
PAF1-202ENST00000416728 THOC6Q86W42 341 aaKnown RBP13.52□□□□□ -0.25
PAF1-202ENST00000416728 ANKRD53Q8N9V6 530 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 ARMC2Q8NEN0 867 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 ADAMTS18Q8TE60 1221 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 SLCO2A1Q92959 643 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 TMEM125Q96AQ2 219 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 PDLIM5Q96HC4 596 aaKnown RBP13.52□□□□□ -0.25
PAF1-202ENST00000416728 TRIM51Q9BSJ1 452 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 SLC6A16Q9GZN6 736 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 RHBGQ9H310 441 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 PLAC1Q9HBJ0 212 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 CHMP2BQ9UQN3 213 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 KCNE2Q9Y6J6 123 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 LRBAP50851 2863 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 CSMD1Q96PZ7 3565 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 SCN2AQ99250 2005 aa13.52□□□□□ -0.25
PAF1-202ENST00000416728 IGKV3D-11A0A0A0MRZ8 115 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 TCRBV16S1A1N1A0A5B0 115 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 FCHO1O14526 889 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 CLDN14O95500 239 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 ZNF37AP17032 561 aaPredicted RBP13.51□□□□□ -0.25
PAF1-202ENST00000416728 ITGA8P53708 1063 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 MORF4L2Q15014 288 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 PPP1R3AQ16821 1122 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 NXPE4Q6UWF7 544 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 CPSF7Q8N684 471 aaKnown RBP13.51□□□□□ -0.25
PAF1-202ENST00000416728 MTFMTQ96DP5 389 aaKnown RBP13.51□□□□□ -0.25
PAF1-202ENST00000416728 DEFB126Q9BYW3 111 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 TRIM45Q9H8W5 580 aaPredicted RBP13.51□□□□□ -0.25
PAF1-202ENST00000416728 IKZF3Q9UKT9 509 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 SLC22A14Q9Y267 594 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 SCN3AQ9NY46 2000 aa13.51□□□□□ -0.25
PAF1-202ENST00000416728 A8MUA0 341 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 CDC7O00311 574 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 PRRG2O14669 202 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 SERPINA6P08185 405 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 SMIM10L1P0DMW3 83 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 SAT1P21673 171 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 IVDP26440 423 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 TRHRP34981 398 aaPredicted RBP13.5□□□□□ -0.25
PAF1-202ENST00000416728 HLCSP50747 726 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 HSF1Q00613 529 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 HYAL2Q12891 473 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 TOR1AIP1Q5JTV8 583 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 EID3Q8N140 333 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 NKAPQ8N5F7 415 aaKnown RBP13.5□□□□□ -0.25
PAF1-202ENST00000416728 NFAM1Q8NET5 270 aaPredicted RBP13.5□□□□□ -0.25
PAF1-202ENST00000416728 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 ANKRD7Q92527 254 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 LRRC39Q96DD0 335 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 SMIM10Q96HG1 83 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 LURAP1Q96LR2 239 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 PWWP2AQ96N64 755 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 EGFL8Q99944 293 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 TRIM8Q9BZR9 551 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 KLHL31Q9H511 634 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 NECTIN3Q9NQS3 549 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 ZFATQ9P243 1243 aa13.5□□□□□ -0.25
PAF1-202ENST00000416728 KLF13Q9Y2Y9 288 aaPredicted RBP13.5□□□□□ -0.25
PAF1-202ENST00000416728 NPEPPSL1A6NEC2 478 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 ZNHIT1O43257 154 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 HNMTP50135 292 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 STXBP1P61764 594 aaKnown RBP13.49□□□□□ -0.25
PAF1-202ENST00000416728 CDKL1Q00532 357 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 CDSNQ15517 529 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 RNFT1Q5M7Z0 435 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 STEAP4Q687X5 459 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 NCCRP1Q6ZVX7 275 aaPredicted RBP13.49□□□□□ -0.25
PAF1-202ENST00000416728 SYDE1Q6ZW31 735 aaPredicted RBP13.49□□□□□ -0.25
PAF1-202ENST00000416728 ZNF227Q86WZ6 799 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 DOLPP1Q86YN1 238 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 CA13Q8N1Q1 262 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 ARMC10Q8N2F6 343 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 POGLUT1Q8NBL1 392 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 CREB3L4Q8TEY5 395 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 FAR2Q96K12 515 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 WDR83Q9BRX9 315 aaKnown RBP13.49□□□□□ -0.25
PAF1-202ENST00000416728 MMACHCQ9Y4U1 282 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 PSAT1Q9Y617 370 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 TEX264Q9Y6I9 313 aa13.49□□□□□ -0.25
PAF1-202ENST00000416728 TRBV11-1A0A0K0K1C0 115 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 FAM95CA0A1B0GW59 222 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 C4orf51C9J302 202 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 E9PLN8 166 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 C19orf84I3L1E1 186 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 TFECO14948 347 aaPredicted RBP13.48□□□□□ -0.25
PAF1-202ENST00000416728 ZSCAN12O43309 604 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 MYO1DO94832 1006 aa13.48□□□□□ -0.25
PAF1-202ENST00000416728 TCP1P17987 556 aaKnown RBP13.48□□□□□ -0.25
PAF1-202ENST00000416728 GNAZP19086 355 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms