RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TRBC2A0A5B9 178 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 USP27XA6NNY8 438 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 OR1F1O43749 312 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 B4GALT2O60909 372 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 HAUS5O94927 633 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 CD99P14209 185 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 RFC3P40938 356 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 CCR8P51685 355 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 TIAL1Q01085 375 aaKnown RBP eCLIP14.37□□□□□ -0.11
DDX56-202ENST00000415758 TERF2Q15554 542 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 UGT3A1Q6NUS8 523 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 MBOAT1Q6ZNC8 495 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 ACAD11Q709F0 780 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 MDGA2Q7Z553 956 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 CYP4X1Q8N118 509 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 OR52N2Q8NGI0 321 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 OR56A3Q8NH54 315 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 CALML6Q8TD86 181 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 UTP15Q8TED0 518 aaKnown RBP14.37□□□□□ -0.11
DDX56-202ENST00000415758 EEF1AKMT1Q8WVE0 214 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 SNF8Q96H20 258 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 FOXC2Q99958 501 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 PRDM9Q9NQV7 894 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 HOMER3Q9NSC5 361 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 ZFP69BQ9UJL9 534 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 FBXO5Q9UKT4 447 aa14.37□□□□□ -0.11
DDX56-202ENST00000415758 PPIEQ9UNP9 301 aaKnown RBP14.37□□□□□ -0.11
DDX56-202ENST00000415758 PRRC2AP48634 2157 aaKnown RBP14.37□□□□□ -0.11
DDX56-202ENST00000415758 MAP1AP78559 2803 aaPredicted RBP14.36□□□□□ -0.11
DDX56-202ENST00000415758 CDC40O60508 579 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX56-202ENST00000415758 DIAPH2O60879 1101 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 B3GALT4O96024 378 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 SMIM10L1P0DMW3 83 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 HOXB4P17483 251 aaPredicted RBP14.36□□□□□ -0.11
DDX56-202ENST00000415758 MAOAP21397 527 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 AHRP35869 848 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 RGS4P49798 205 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 CLCN2P51788 898 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 IST1P53990 364 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 OLR1P78380 273 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 DHX9Q08211 1270 aaKnown RBP14.36□□□□□ -0.11
DDX56-202ENST00000415758 ANKRD22Q5VYY1 191 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 DUPD1Q68J44 220 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 PAOXQ6QHF9 649 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 ABHD13Q7L211 337 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 PALM2Q8IXS6 379 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 CYP4Z2PQ8N1L4 340 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 RPRMLQ8N4K4 120 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 MCUQ8NE86 351 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 B3GNT7Q8NFL0 401 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 SMIM10Q96HG1 83 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 SEC16BQ96JE7 1060 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 OR4K3Q96R72 315 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 NECTIN3Q9NQS3 549 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 ZFATQ9P243 1243 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 GUCA1BQ9UMX6 200 aa14.36□□□□□ -0.11
DDX56-202ENST00000415758 FAM90A27PA6NNH2 459 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 KLK8O60259 260 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 ITGA10O75578 1167 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 NADKO95544 446 aaPredicted RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 FGGP02679 453 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 HIST1H2AGP0C0S8 130 aaPredicted RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 ZNF888P0CJ79 500 aaPredicted RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 RNH1P13489 461 aaKnown RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 HIST1H2ADP20671 130 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 SCTRP47872 440 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 GPR143P51810 404 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 NUP107P57740 925 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 RGS1Q08116 209 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 PMPCAQ10713 525 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 PHKG1Q16816 387 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 TMEM200AQ86VY9 491 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 CCDC71Q8IV32 467 aaPredicted RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 CLYBLQ8N0X4 340 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 TBC1D19Q8N5T2 526 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 TMEM156Q8N614 296 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 ARMC2Q8NEN0 867 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 NINJ1Q92982 152 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 ALKBH8Q96BT7 664 aaKnown RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 HIST1H2AHQ96KK5 128 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 HIST1H2AJQ99878 128 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 H2AFJQ9BTM1 129 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 SLC6A16Q9GZN6 736 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 XAB2Q9HCS7 855 aaKnown RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 C20orf96Q9NUD7 363 aaPredicted RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 TAS2R13Q9NYV9 303 aa14.35□□□□□ -0.11
DDX56-202ENST00000415758 TRMT6Q9UJA5 497 aaKnown RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 ANKHD1Q8IWZ3 2542 aaKnown RBP14.35□□□□□ -0.11
DDX56-202ENST00000415758 URADA6NGE7 173 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 PDE9AO76083 593 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 TUBB4AP04350 444 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 MAGEA3P43357 314 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 AP1S2P56377 157 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 GPR85P60893 370 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 HYAL2Q12891 473 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 GPS1Q13098 491 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 TRIP13Q15645 432 aaPredicted RBP14.34□□□□□ -0.11
DDX56-202ENST00000415758 KCTD19Q17RG1 926 aaPredicted RBP14.34□□□□□ -0.11
DDX56-202ENST00000415758 GXYLT1Q4G148 440 aa14.34□□□□□ -0.11
DDX56-202ENST00000415758 CATSPEREQ5SY80 951 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms