RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 MT-ND1P03886 318 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 FUCA1P04066 466 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 IGHV4-34P06331 123 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ITGAMP11215 1152 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ACP5P13686 325 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SLC2A4P14672 509 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 JUPP14923 745 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 MAPK1P28482 360 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SHMT2P34897 504 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PLA2G16P53816 162 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PPP2R2BQ00005 443 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 MVKQ03426 396 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 DGUOKQ16854 277 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 CCSMST1Q4G0I0 132 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 XAF1Q6GPH4 301 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 WASH2PQ6VEQ5 465 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ABI3BPQ7Z7G0 1075 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SYTL1Q8IYJ3 562 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 MICU2Q8IYU8 434 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 RGL4Q8IZJ4 473 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SIX5Q8N196 739 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 TMEM132CQ8N3T6 1108 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SPEM1Q8N4L4 309 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SVOPQ8N4V2 548 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 RAB42Q8N4Z0 105 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 CAMKK1Q8N5S9 505 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 DCBLD1Q8N8Z6 715 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 CHDHQ8NE62 594 aaPredicted RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 BPIFB6Q8NFQ5 453 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 MAFAQ8NHW3 353 aaPredicted RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 FBXO30Q8TB52 745 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 NCLNQ969V3 563 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PYCR2Q96C36 320 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 ZNF583Q96ND8 569 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 RAB11FIP5Q9BXF6 653 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 EHD1Q9H4M9 534 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PIF1Q9H611 641 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 FGF22Q9HCT0 170 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 WASH6PQ9NQA3 447 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 NECTIN3Q9NQS3 549 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 TM7SF3Q9NS93 570 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SCN3BQ9NY72 215 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 SLAMF8Q9P0V8 285 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 KLQ9UEF7 1012 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 CYP8B1Q9UNU6 501 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 INVSQ9Y283 1065 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 TDRKHQ9Y2W6 561 aaKnown RBP11.12□□□□□ -0.63
RFFL-205ENST00000415395 NAALAD2Q9Y3Q0 740 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PCDHGB1Q9Y5G3 927 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 HEBP2Q9Y5Z4 205 aa11.12□□□□□ -0.63
RFFL-205ENST00000415395 PRUNE2Q8WUY3 3088 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 LOC100130705A0A1B0GUX0 176 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 ZNF99A8MXY4 864 aaPredicted RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 SLC16A6O15403 523 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 HS6ST1O60243 411 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 KDM1AO60341 852 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 ATP6V1G1O75348 118 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 FKBP9O95302 570 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 ITPKAP23677 461 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 PRPH2P23942 346 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 GNPDA1P46926 289 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 HTR6P50406 440 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 HNRNPFP52597 415 aaKnown RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 CLDN2P57739 230 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 TBPL1P62380 186 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 RPL38P63173 70 aaKnown RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 IRF8Q02556 426 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 KCNC4Q03721 635 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 CHIT1Q13231 466 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 ABRAXAS2Q15018 415 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 GTF2IRD2BQ6EKJ0 949 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 GRHL2Q6ISB3 625 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 GTF2IRD2Q86UP8 949 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 LRRC56Q8IYG6 542 aaPredicted RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 SLC15A4Q8N697 577 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 ARL10Q8N8L6 244 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 TBC1D20Q96BZ9 403 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 FAM120BQ96EK7 910 aaKnown RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 WDR34Q96EX3 536 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 MED8Q96G25 268 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 HHIPQ96QV1 700 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 MYOCQ99972 504 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 FOXQ1Q9C009 403 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 NAA50Q9GZZ1 169 aaKnown RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 PCBD2Q9H0N5 130 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 SOX17Q9H6I2 414 aaPredicted RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 C6orf106Q9H6K1 298 aaPredicted RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 MVB12BQ9H7P6 319 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 TBC1D17Q9HA65 648 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 CARS2Q9HA77 564 aaKnown RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 CCDC177Q9NQR7 707 aaPredicted RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 SELENONQ9NZV5 590 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 ZNF490Q9ULM2 529 aaPredicted RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 SAMD4AQ9UPU9 718 aaKnown RBP11.11□□□□□ -0.63
RFFL-205ENST00000415395 GPSM3Q9Y4H4 160 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 CCL27Q9Y4X3 112 aa11.11□□□□□ -0.63
RFFL-205ENST00000415395 PCM1Q15154 2024 aa11.1□□□□□ -0.63
RFFL-205ENST00000415395 IGHV1OR15-9A0A0B4J2B8 117 aa11.1□□□□□ -0.63
RFFL-205ENST00000415395 H0YIV9 168 aa11.1□□□□□ -0.63
RFFL-205ENST00000415395 M0R3G1 203 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms