RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 TREX2Q9BQ50 279 aaPredicted RBP8.52□□□□□ -1.05
MRPL48-204ENST00000411840 FAM167BQ9BTA0 163 aa8.52□□□□□ -1.05
MRPL48-204ENST00000411840 DEFB126Q9BYW3 111 aa8.52□□□□□ -1.05
MRPL48-204ENST00000411840 ARL15Q9NXU5 204 aa8.52□□□□□ -1.05
MRPL48-204ENST00000411840 TAS2R13Q9NYV9 303 aa8.52□□□□□ -1.05
MRPL48-204ENST00000411840 HRH3Q9Y5N1 445 aa8.52□□□□□ -1.05
MRPL48-204ENST00000411840 SEC16AO15027 2179 aa8.52□□□□□ -1.05
MRPL48-204ENST00000411840 POLQO75417 2590 aa8.52□□□□□ -1.05
MRPL48-204ENST00000411840 TCRBV16S1A1N1A0A5B0 115 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 PEX1O43933 1283 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 TPOP07202 933 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 ZNF888P0CJ79 500 aaPredicted RBP8.51□□□□□ -1.05
MRPL48-204ENST00000411840 MAOAP21397 527 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 GABRB3P28472 473 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 RFC3P40938 356 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 HNF4AP41235 474 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 MAGEA3P43357 314 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 MEOX1P50221 254 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 CDKN2DP55273 166 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 IL2P60568 153 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 RAB8AP61006 207 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 CSHL1Q14406 222 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 CATSPEREQ5SY80 951 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 NIPAL1Q6NVV3 410 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 QSOX2Q6ZRP7 698 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 ZNF662Q6ZS27 426 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 CEP128Q6ZU80 1094 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 ABHD13Q7L211 337 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 RETREG3Q86VR2 466 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 ARMC10Q8N2F6 343 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 MARVELD2Q8N4S9 558 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 TBC1D19Q8N5T2 526 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 NAT8LQ8N9F0 302 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 POGLUT1Q8NBL1 392 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
MRPL48-204ENST00000411840 C2CD4AQ8NCU7 369 aaPredicted RBP8.51□□□□□ -1.05
MRPL48-204ENST00000411840 OR56A3Q8NH54 315 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 FAM57AQ8TBR7 257 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 NT5CQ8TCD5 201 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 UTP15Q8TED0 518 aaKnown RBP8.51□□□□□ -1.05
MRPL48-204ENST00000411840 MAGOHBQ96A72 148 aaKnown RBP8.51□□□□□ -1.05
MRPL48-204ENST00000411840 LINGO1Q96FE5 620 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 RHBGQ9H310 441 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 CLK4Q9HAZ1 481 aaKnown RBP8.51□□□□□ -1.05
MRPL48-204ENST00000411840 NECTIN3Q9NQS3 549 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 PRDM9Q9NQV7 894 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 ZFATQ9P243 1243 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 ZFP69BQ9UJL9 534 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 KLF13Q9Y2Y9 288 aaPredicted RBP8.51□□□□□ -1.05
MRPL48-204ENST00000411840 NEU2Q9Y3R4 380 aa8.51□□□□□ -1.05
MRPL48-204ENST00000411840 NIPBLQ6KC79 2804 aaeCLIP8.51□□□□□ -1.05
MRPL48-204ENST00000411840 MAP1AP78559 2803 aaPredicted RBP8.5□□□□□ -1.05
MRPL48-204ENST00000411840 SNRNP200O75643 2136 aaKnown RBP8.5□□□□□ -1.05
MRPL48-204ENST00000411840 IGKV3D-11A0A0A0MRZ8 115 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 CTAGE15A4D2H0 777 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 PABPN1LA6NDY0 278 aaKnown RBP8.5□□□□□ -1.05
MRPL48-204ENST00000411840 SAGE2PA6NJ88 616 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 A8MUA0 341 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 PSMD12O00232 456 aaPredicted RBP8.5□□□□□ -1.05
MRPL48-204ENST00000411840 FCHO1O14526 889 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 TFECO14948 347 aaPredicted RBP8.5□□□□□ -1.05
MRPL48-204ENST00000411840 FANCGO15287 622 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 HS6ST1O60243 411 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 CDC40O60508 579 aaKnown RBP eCLIP8.5□□□□□ -1.05
MRPL48-204ENST00000411840 KRT38O76015 456 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 PDE9AO76083 593 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 AHSGP02765 367 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 RNH1P13489 461 aaKnown RBP8.5□□□□□ -1.05
MRPL48-204ENST00000411840 TFEBP19484 476 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 SCTRP47872 440 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 AP1S2P56377 157 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 RGS1Q08116 209 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 HYAL2Q12891 473 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 CRYMQ14894 314 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 CMPK2Q5EBM0 449 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 RBM20Q5T481 1227 aaKnown RBP8.5□□□□□ -1.05
MRPL48-204ENST00000411840 CCDC137Q6PK04 289 aaKnown RBP8.5□□□□□ -1.05
MRPL48-204ENST00000411840 MDGA2Q7Z553 956 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 CTAGE6Q86UF2 777 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 TMEM156Q8N614 296 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 ANKRD53Q8N9V6 530 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 TRPV3Q8NET8 790 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 TRIM58Q8NG06 486 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 LILRB4Q8NHJ6 448 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 C16orf52Q8NHV5 167 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 SLC5A11Q8WWX8 675 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 ATL1Q8WXF7 558 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 NEIL2Q969S2 332 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 FBXL8Q96CD0 374 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 MS4A14Q96JA4 679 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 TSNARE1Q96NA8 513 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 TRIM54Q9BYV2 358 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 SLC6A16Q9GZN6 736 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 SPNS1Q9H2V7 528 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 KLHL31Q9H511 634 aa8.5□□□□□ -1.05
MRPL48-204ENST00000411840 DOCK10Q96BY6 2186 aa8.49□□□□□ -1.05
MRPL48-204ENST00000411840 TRBV11-1A0A0K0K1C0 115 aa8.49□□□□□ -1.05
MRPL48-204ENST00000411840 NKX2-6A6NCS4 301 aa8.49□□□□□ -1.05
MRPL48-204ENST00000411840 URADA6NGE7 173 aa8.49□□□□□ -1.05
MRPL48-204ENST00000411840 USP27XA6NNY8 438 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms