RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ASB5Q8WWX0 329 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SERPINB12Q96P63 405 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SARGQ9BW04 601 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 IARS2Q9NSE4 1012 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TAS2R13Q9NYV9 303 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TCRBV16S1A1N1A0A5B0 115 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 FAM90A27PA6NNH2 459 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 USP27XA6NNY8 438 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 FOXO6A8MYZ6 492 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 DIAPH2O60879 1101 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PDE9AO76083 593 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CD1EP15812 388 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TFEBP19484 476 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CXCR5P32302 372 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 HNF4AP41235 474 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RAB8AP61006 207 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 HYAL2Q12891 473 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CMPK2Q5EBM0 449 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CATSPEREQ5SY80 951 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ABHD13Q7L211 337 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CYP4Z2PQ8N1L4 340 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ARMC10Q8N2F6 343 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 AGGF1Q8N302 714 aaeCLIP13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TMEM156Q8N614 296 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 LILRB4Q8NHJ6 448 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 C16orf52Q8NHV5 167 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NT5CQ8TCD5 201 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 UTP15Q8TED0 518 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RND1Q92730 232 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SIGLEC10Q96LC7 697 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 FAM167BQ9BTA0 163 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 UCK2Q9BZX2 261 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RHBGQ9H310 441 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TP63Q9H3D4 680 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 KCNJ16Q9NPI9 418 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NECTIN3Q9NQS3 549 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PRDM9Q9NQV7 894 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NPDC1Q9NQX5 325 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ARL15Q9NXU5 204 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ZFP69BQ9UJL9 534 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RNF6Q9Y252 685 aa13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 INTS1Q8N201 2190 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB2-229ENST00000411527 IGKV3D-11A0A0A0MRZ8 115 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TRBV11-1A0A0K0K1C0 115 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PABPN1LA6NDY0 278 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PSMD12O00232 456 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RNH1P13489 461 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 IGFBP2P18065 325 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CHRNB4P30926 498 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SCTRP47872 440 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CLCN2P51788 898 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ART1P52961 327 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 GPR85P60893 370 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CSHL1Q14406 222 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TTC27Q6P3X3 843 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MDGA2Q7Z553 956 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 STRA8Q7Z7C7 330 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 APCDD1LQ8NCL9 501 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ARMC2Q8NEN0 867 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 B3GNT7Q8NFL0 401 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 OR52N2Q8NGI0 321 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 OR56A3Q8NH54 315 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 LINGO1Q96FE5 620 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 DEFB127Q9H1M4 99 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SPNS1Q9H2V7 528 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CLK4Q9HAZ1 481 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 LZTFL1Q9NQ48 299 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ZFATQ9P243 1243 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TNFRSF10DQ9UBN6 386 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 FBXW2Q9UKT8 454 aa13.3□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ZFHX3Q15911 3703 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PHF3Q92576 2039 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CTAGE15A4D2H0 777 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 URADA6NGE7 173 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ITGA10O75578 1167 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TOXO94900 526 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 AHRP35869 848 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MAGEA3P43357 314 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CDKN2DP55273 166 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TFF3Q07654 80 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PMPCAQ10713 525 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RBM20Q5T481 1227 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ARHGAP11AQ6P4F7 1023 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CTAGE6Q86UF2 777 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CCDC71Q8IV32 467 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 DMRTC2Q8IXT2 367 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RPRMLQ8N4K4 120 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ZFP62Q8NB50 900 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 C2CD4AQ8NCU7 369 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SLC5A11Q8WWX8 675 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NEIL2Q969S2 332 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MAGOHBQ96A72 148 aaKnown RBP13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ZNF559Q9BR84 538 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TRIM54Q9BYV2 358 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 KLHL31Q9H511 634 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PLSCR2Q9NRY7 297 aa13.29□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MYO1DO94832 1006 aa13.28□□□□□ -0.28
HLA-DQB2-229ENST00000411527 GUCA1CO95843 209 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms