RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PPP1R32Q7Z5V6 425 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 CROCCP2Q86T23 111 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 ZC3H7AQ8IWR0 971 aaKnown RBP10.32□□□□□ -0.76
CHMP3-205ENST00000409810 LAS2Q8IYD9 372 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 PRSS58Q8IYP2 241 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 CCDC63Q8NA47 563 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 OR2L5Q8NG80 312 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 RDH11Q8TC12 318 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 ADAMTS18Q8TE60 1221 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 METTL21AQ8WXB1 218 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 MS4A6EQ96DS6 147 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 CMTM7Q96FZ5 175 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 NTMT1Q9BV86 223 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 NPLQ9BXD5 320 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-205ENST00000409810 MS4A8Q9BY19 250 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 COPS7BQ9H9Q2 264 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-205ENST00000409810 P4HTMQ9NXG6 502 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 SENP1Q9P0U3 644 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 C19orf25Q9UFG5 118 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-205ENST00000409810 LGALS13Q9UHV8 139 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 PCTPQ9UKL6 214 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 IGSF10Q6WRI0 2623 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 PIEZO2Q9H5I5 2752 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SPTA1P02549 2419 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 LRRC14BA6NHZ5 514 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 H0YIV9 168 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 B3GALT2O43825 422 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SUPT7LO94864 414 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 MLYCDO95822 493 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SBK3P0C264 359 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SMIM10L1P0DMW3 83 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 ACPPP15309 386 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 PIK3CBP42338 1070 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 RAP1GDS1P52306 607 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 PRKAA2P54646 552 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 MTTPP55157 894 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 FOXL2P58012 376 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 BTN3A2P78410 334 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 CLCQ05315 142 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SLC18A2Q05940 514 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 IFT88Q13099 833 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 DDX39BQ13838 428 aaKnown RBP10.31□□□□□ -0.76
CHMP3-205ENST00000409810 LY6DQ14210 128 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 RCN2Q14257 317 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 CPSF6Q16630 551 aaKnown RBP eCLIP10.31□□□□□ -0.76
CHMP3-205ENST00000409810 ADPRMQ3LIE5 342 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 KRT71Q3SY84 523 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 MINDY4Q4G0A6 757 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 GGTA1PQ4G0N0 100 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 TMEM35AQ53FP2 167 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 DCAF10Q5QP82 559 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 ZNF678Q5SXM1 525 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 PCSK4Q6UW60 755 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 ZYG11AQ6WRX3 759 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SH2D5Q6ZV89 423 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 CHSY3Q70JA7 882 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 VN1R5Q7Z5H4 357 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 MILR1Q7Z6M3 343 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 TRABD2AQ86V40 505 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 PDSS2Q86YH6 399 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 C4orf33Q8N1A6 199 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 TMEM151AQ8N4L1 468 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 L3MBTL4Q8NA19 623 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 OR7G3Q8NG95 312 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 C9orf43Q8TAL5 461 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-205ENST00000409810 ZNF483Q8TF39 744 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-205ENST00000409810 ZNF473Q8WTR7 871 aaKnown RBP10.31□□□□□ -0.76
CHMP3-205ENST00000409810 TBC1D20Q96BZ9 403 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 PEX11GQ96HA9 241 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SMIM10Q96HG1 83 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 APOPT1Q96IL0 206 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 KCNC2Q96PR1 638 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SERINC2Q96SA4 455 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SMC6Q96SB8 1091 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 TMEM109Q9BVC6 243 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 KLHL31Q9H511 634 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 SEMA4BQ9NPR2 832 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-205ENST00000409810 MKS1Q9NXB0 559 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 MKL2Q9ULH7 1088 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 ZNF490Q9ULM2 529 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-205ENST00000409810 HS3ST3B1Q9Y662 390 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 ATRXP46100 2492 aa10.31□□□□□ -0.76
CHMP3-205ENST00000409810 BSNQ9UPA5 3926 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 CCDC151A5D8V7 595 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 SYNDIG1LA6NDD5 238 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 SOCS6O14544 535 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 OR7A17O14581 309 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 RGS16O15492 202 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 CHST10O43529 356 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 DLX3O60479 287 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 ALOX12BO75342 701 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 PROCP04070 461 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 FHP07954 510 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 C8orf89P0DMQ9 161 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 RNH1P13489 461 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 IMPDH1P20839 514 aa10.3□□□□□ -0.76
CHMP3-205ENST00000409810 HNRNPH1P31943 449 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 TSFMP43897 325 aaKnown RBP10.3□□□□□ -0.76
CHMP3-205ENST00000409810 CCL11P51671 97 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms