RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RNH1P13489 461 aaKnown RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 TAS2R50P59544 299 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 GPX6P59796 221 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 GUCY2DQ02846 1103 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 TGM3Q08188 693 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 C2orf54Q08AI8 447 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 MRPL49Q13405 166 aaKnown RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 RCN2Q14257 317 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 ZNF460Q14592 562 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 TBCCQ15814 346 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 HIST2H2ACQ16777 129 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 MEP1AQ16819 746 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 KBTBD12Q3ZCT8 623 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 PAGE2BQ5JRK9 111 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 HIST2H2AA3Q6FI13 130 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 TMPRSS11BQ86T26 416 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 SLC5A8Q8N695 610 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 PDPRQ8NCN5 879 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 CATSPER1Q8NEC5 780 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 SRFBP1Q8NEF9 429 aaKnown RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 ADAMTS18Q8TE60 1221 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 CREB3L4Q8TEY5 395 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 UBE2E3Q969T4 207 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 WDR34Q96EX3 536 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 PTCD3Q96EY7 689 aaKnown RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 MESP1Q9BRJ9 268 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 EFCAB11Q9BUY7 163 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 DNAJC11Q9NVH1 559 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 PTBP2Q9UKA9 531 aaKnown RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 CSAG2Q9Y5P2 127 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 USP9XQ93008 2570 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 BLACEA4D250 179 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 LRIT2A6NDA9 550 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 A8MUI8 341 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 CLDN4O14493 209 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 SEC24DO94855 1032 aaPredicted RBP13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 WDPCPO95876 746 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 C1QAP02745 245 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 PHBP35232 272 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 CASP2P42575 452 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 PER3P56645 1201 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 OR4D2P58180 307 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 MRPS25P82663 173 aaKnown RBP13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 ZNF33BQ06732 778 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 PCDH1Q08174 1060 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 HYAL2Q12891 473 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 WHAMMP3Q1A5X7 153 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 SFT2D3Q587I9 215 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 ACER2Q5QJU3 275 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 TBC1D1Q86TI0 1168 aaPredicted RBP13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 RELL1Q8IUW5 271 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 PPM1NQ8N819 430 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 GAL3ST3Q96A11 431 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 C5orf34Q96MH7 638 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 PTCHD1Q96NR3 888 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 SLX1AQ9BQ83 275 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 ROGDIQ9GZN7 287 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 KCNK13Q9HB14 408 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 PRDM9Q9NQV7 894 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 OLAHQ9NV23 265 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 WWOXQ9NZC7 414 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 CD274Q9NZQ7 290 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 ADGRE2Q9UHX3 823 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 RNF112Q9ULX5 631 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 MRPS33Q9Y291 106 aaKnown RBP13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 NTNG1Q9Y2I2 539 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 ACOT9Q9Y305 439 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 MMACHCQ9Y4U1 282 aa13.67□□□□□ -0.22
NIF3L1-205ENST00000409588 A0A1B0GUH1 482 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 SYCE1LA8MT33 242 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 PRAMEF2O60811 474 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 SEMA7AO75326 666 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 RASAL1O95294 804 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 MLYCDO95822 493 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 SERPINB1P30740 379 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 GDF5P43026 501 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 EFNA3P52797 238 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 HSD17B7P56937 341 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 SNRPNP63162 240 aaKnown RBP13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 TERF2Q15554 542 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 PDK4Q16654 411 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 ADPRMQ3LIE5 342 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 ZNF324BQ6AW86 544 aaPredicted RBP13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 C8orf74Q6P047 294 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 PAPD4Q6PIY7 484 aaKnown RBP13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 LANCL3Q6ZV70 420 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 RAPH1Q70E73 1250 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 ISCA2Q86U28 154 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 CCDC25Q86WR0 208 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 OR5T3Q8NGG3 340 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 RHEBL1Q8TAI7 183 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 FBF1Q8TES7 1133 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 CD244Q9BZW8 370 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 SPNS1Q9H2V7 528 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 RHBGQ9H310 441 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 CAB39LQ9H9S4 337 aa13.66□□□□□ -0.22
NIF3L1-205ENST00000409588 PLA2G3Q9NZ20 509 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms