RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 OR8J3Q8NGG0 315 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 BAHD1Q8TBE0 780 aaPredicted RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 MIEF2Q96C03 454 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 COQ8BQ96D53 544 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 MS4A6EQ96DS6 147 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 C17orf62Q9BQA9 187 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 DUSP26Q9BV47 211 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 ALG2Q9H553 416 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 UCK1Q9HA47 277 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 FAM120CQ9NX05 1096 aaKnown RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 PILRBQ9UKJ0 227 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 POMT2Q9UKY4 750 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 MAPRE3Q9UPY8 281 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 PCDHB14Q9Y5E9 798 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 LAMA1P25391 3075 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 A0A0A6YYD5 115 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 ARHGAP10A1A4S6 786 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 LILRA5A6NI73 299 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 P2RX6O15547 441 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 ERI3O43414 337 aaKnown RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 GPR37L1O60883 481 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 DNAJA2O60884 412 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 UBXN7O94888 489 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 FKBP9O95302 570 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 LMNAP02545 664 aaKnown RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 HSD17B1P14061 328 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 GNSP15586 552 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 PTPN6P29350 595 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 SSR2P43308 183 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 GSK3BP49841 420 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 MAPK12P53778 367 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 LIPEQ05469 1076 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 C2orf80Q0P641 193 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 CCDC6Q16204 474 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 PRSS53Q2L4Q9 553 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 C14orf28Q4W4Y0 310 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 OR4C11Q6IEV9 310 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 ASPGQ86U10 573 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 DTWD2Q8NBA8 298 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 TM4SF18Q96CE8 201 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 QRFPRQ96P65 431 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 OR2A5Q96R48 311 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 SLC38A3Q99624 504 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 SLC6A16Q9GZN6 736 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 ABCG4Q9H172 646 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 IKZF5Q9H5V7 419 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 DDX31Q9H8H2 851 aaKnown RBP13.4□□□□□ -0.26
GPNMB-203ENST00000409458 SH3BP4Q9P0V3 963 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 ADAM29Q9UKF5 820 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 PILRAQ9UKJ1 303 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 USP22Q9UPT9 525 aa13.4□□□□□ -0.26
GPNMB-203ENST00000409458 A0A0J9YVX5 310 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 RFXANKO14593 260 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 ERN1O75460 977 aaKnown RBP13.39□□□□□ -0.27
GPNMB-203ENST00000409458 GSNP06396 782 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 CAPZBP47756 277 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 HNRNPFP52597 415 aaKnown RBP13.39□□□□□ -0.27
GPNMB-203ENST00000409458 EEFSECP57772 596 aaKnown RBP13.39□□□□□ -0.27
GPNMB-203ENST00000409458 KLC1Q07866 573 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 BIRC2Q13490 618 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 DUOXA1Q1HG43 343 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 RUNDC3AQ59EK9 446 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 C6orf132Q5T0Z8 1188 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 ARMC6Q6NXE6 501 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 ABHD17CQ6PCB6 329 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 DGLUCYQ7Z3D6 616 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 SLC25A45Q8N413 288 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 OR2L5Q8NG80 312 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 DNAJB8Q8NHS0 232 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 NT5CQ8TCD5 201 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 SLC26A7Q8TE54 656 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 PYDC1Q8WXC3 89 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 ZUFSPQ96AP4 578 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 PPCDCQ96CD2 204 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 AURKBQ96GD4 344 aaPredicted RBP13.39□□□□□ -0.27
GPNMB-203ENST00000409458 ELF4Q99607 663 aaPredicted RBP13.39□□□□□ -0.27
GPNMB-203ENST00000409458 PRPF18Q99633 342 aaKnown RBP13.39□□□□□ -0.27
GPNMB-203ENST00000409458 CPPED1Q9BRF8 314 aaPredicted RBP13.39□□□□□ -0.27
GPNMB-203ENST00000409458 BHLHE41Q9C0J9 482 aaPredicted RBP13.39□□□□□ -0.27
GPNMB-203ENST00000409458 DCLRE1BQ9H816 532 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 FSCN3Q9NQT6 498 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 ERVK-11Q9UQG0 969 aa13.39□□□□□ -0.27
GPNMB-203ENST00000409458 SH3BP5O60239 455 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 PROS1P07225 676 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 GIMD1P0DJR0 217 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 ATP6V1B2P21281 511 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 RPL3P39023 403 aaKnown RBP13.38□□□□□ -0.27
GPNMB-203ENST00000409458 SNRPNP63162 240 aaKnown RBP13.38□□□□□ -0.27
GPNMB-203ENST00000409458 TRAP1Q12931 704 aaKnown RBP13.38□□□□□ -0.27
GPNMB-203ENST00000409458 MPEG1Q2M385 716 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 SPATS1Q496A3 300 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 FRMPD2BQ6IN97 320 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 RNF44Q7L0R7 432 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 R3HCC1LQ7Z5L2 792 aaKnown RBP13.38□□□□□ -0.27
GPNMB-203ENST00000409458 IFNEQ86WN2 208 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 KCT2Q8NC54 265 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 PIGKQ92643 395 aa13.38□□□□□ -0.27
GPNMB-203ENST00000409458 CIDECQ96AQ7 238 aaPredicted RBP13.38□□□□□ -0.27
GPNMB-203ENST00000409458 TM4SF19Q96DZ7 209 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms