RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 HOXD8P13378 290 aaPredicted RBP17.08■□□□□ 0.32
SMPD4-202ENST00000409031 SHMT2P34897 504 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 TCEA2Q15560 299 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 NRARPQ7Z6K4 114 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 KRTCAP2Q8N6L1 136 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 MYOCQ99972 504 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 ALPPP05187 535 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 RABGGTBP53611 331 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 SF3A2Q15428 464 aaKnown RBP17.08■□□□□ 0.32
SMPD4-202ENST00000409031 TRAM1Q15629 374 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 MPPE1Q53F39 396 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 SDR16C5Q8N3Y7 309 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 WDR48Q8TAF3 677 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 PTTG3PQ9NZH4 202 aa17.08■□□□□ 0.32
SMPD4-202ENST00000409031 TEX13CA0A0J9YWL9 993 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 FDXRP22570 491 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 EVI2BP34910 448 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 NRIP1P48552 1158 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 CLDN8P56748 225 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 SEC23BQ15437 767 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 TMC8Q8IU68 726 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 HS3ST5Q8IZT8 346 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 OR8K5Q8NH50 307 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 PPP1R13LQ8WUF5 828 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 EXO5Q9H790 373 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 NT5DC2Q9H857 520 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 CHMP1AQ9HD42 196 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-202ENST00000409031 STARD7Q9NQZ5 370 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 DCAF13Q9NV06 445 aaKnown RBP17.07■□□□□ 0.32
SMPD4-202ENST00000409031 TMEM98Q9Y2Y6 226 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 ZFP37Q9Y6Q3 630 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-202ENST00000409031 FAAHO00519 579 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 PI15O43692 258 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 AKR1A1P14550 325 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 LHCGRP22888 699 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 CHMP24386 653 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 NOVP48745 357 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 CTBP2P56545 445 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 ESCO2Q56NI9 601 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 BCL2L15Q5TBC7 163 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 Q8N9G6 341 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-202ENST00000409031 NR4A3Q92570 626 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 OR10H2O60403 315 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 CREBL2O60519 120 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-202ENST00000409031 PRKCGP05129 697 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 CORO1AP31146 461 aaKnown RBP17.07■□□□□ 0.32
SMPD4-202ENST00000409031 RGS6P49758 472 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 ST3GAL3Q11203 375 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 NOXRED1Q6NXP6 359 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 SYNPOQ8N3V7 929 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 MRGPRX2Q96LB1 330 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 NLE1Q9NVX2 485 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-202ENST00000409031 ZNF214Q9UL59 606 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-202ENST00000409031 KLRG2A4D1S0 409 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-202ENST00000409031 CDKN2DP55273 166 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 SGCGQ13326 291 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 ATAD1Q8NBU5 361 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 SCAMP5Q8TAC9 235 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 FAM110BQ8TC76 370 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 DNASE1L2Q92874 299 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 MINDY3Q9H8M7 445 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 A3GALT2U3KPV4 340 aa17.07■□□□□ 0.32
SMPD4-202ENST00000409031 ARNTLO00327 626 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 PRODHO43272 600 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 ELFN1P0C7U0 828 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 SERINC3Q13530 473 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 VGLL4Q14135 290 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 CBX2Q14781 532 aaPredicted RBP17.06■□□□□ 0.32
SMPD4-202ENST00000409031 EIPR1Q53HC9 387 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 SLC22A10Q63ZE4 541 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 ZNF248Q8NDW4 579 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 PPP1R16AQ96I34 528 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 RANGRFQ9HD47 186 aaPredicted RBP17.06■□□□□ 0.32
SMPD4-202ENST00000409031 RHCGQ9UBD6 479 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 OR2AG2A6NM03 316 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 OR4Q2P0C623 313 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 PKLRP30613 574 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 OR3A3P47888 321 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 TAGLNQ01995 201 aaKnown RBP17.06■□□□□ 0.32
SMPD4-202ENST00000409031 GRB14Q14449 540 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 GRK1Q15835 563 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 PTCHD3Q3KNS1 767 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 AGMOQ6ZNB7 445 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 YIPF7Q8N8F6 280 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 RHBDF1Q96CC6 855 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 PCDHB11Q9Y5F2 797 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 MYH1P12882 1939 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 MYH4Q9Y623 1939 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 RCBTB2O95199 551 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 CDK1P06493 297 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 TACSTD2P09758 323 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 IRAK1BP1Q5VVH5 260 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 SLC27A4Q6P1M0 643 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 OSTF1Q92882 214 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 CHFRQ96EP1 664 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 C12orf42Q96LP6 360 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 ZDHHC3Q9NYG2 299 aa17.06■□□□□ 0.32
SMPD4-202ENST00000409031 C2orf92A0A1B0GVN3 265 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 TTC24A2A3L6 582 aaPredicted RBP17.05■□□□□ 0.32
SMPD4-202ENST00000409031 J3QLW9 94 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms