RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 ILF2Q12905 390 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 GRB14Q14449 540 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 IL11RAQ14626 422 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 PTGISQ16647 500 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ECSCRQ19T08 205 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 GSG1Q2KHT4 349 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 VWC2Q2TAL6 325 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ZRANB3Q5FWF4 1079 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 TFDP3Q5H9I0 405 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ZNF544Q6NX49 715 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ARMCX5Q6P1M9 558 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 Q6P435 159 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 RFWD3Q6PCD5 774 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ZNF600Q6ZNG1 722 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 Q6ZVQ6 151 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 DET1Q7L5Y6 550 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 NUFIP2Q7Z417 695 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 UBQLNLQ8IYU4 475 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 BANPQ8N9N5 519 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 APPL2Q8NEU8 664 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 TSPAN14Q8NG11 270 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 OR1B1Q8NGR6 318 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 SEPT1Q8WYJ6 367 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 HDAC2Q92769 488 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 FRAT1Q92837 279 aaPredicted RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 PYCR2Q96C36 320 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 NSUN4Q96CB9 384 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 TMCO6Q96DC7 493 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 OTUB1Q96FW1 271 aaPredicted RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 RBM41Q96IZ5 413 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ZNF830Q96NB3 372 aaPredicted RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 TNFRSF13CQ96RJ3 184 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 FEVQ99581 238 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 NDNQ99608 321 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ZBP1Q9H171 429 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 LIME1Q9H400 295 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 GOLPH3LQ9H4A5 285 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 NOL11Q9H8H0 719 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 CNOT10Q9H9A5 744 aaKnown RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 KCNK13Q9HB14 408 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 C3orf14Q9HBI5 128 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 DNAJC4Q9NNZ3 241 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 GDE1Q9NZC3 331 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 KLK12Q9UKR0 248 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 ZNF215Q9UL58 517 aaPredicted RBP0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 MGAT4AQ9UM21 535 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 RUSC2Q8N2Y8 1516 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 MYO10Q9HD67 2058 aa0.72□□□□□ -2.29
MIR548I3-201ENST00000408378 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 TEX48A0A1B0GUV7 120 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 LOC390937A0A1W2PQ73 354 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 PINLYPA6NC86 204 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 IGLON5A6NGN9 336 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 EPOPA6NHQ4 379 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 TCP10L2B9ZVM9 353 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 LMO7DNF2Z398 122 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 H3BMM5 538 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 PANO1I0J062 215 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 E2F3O00716 465 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 FBP2O00757 339 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 LRRTM2O43300 516 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 ZNF861PO60384 105 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 FRAT2O75474 233 aaPredicted RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 STAM2O75886 525 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 LYPD3O95274 346 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 DNTTP04053 509 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 CSH1P0DML2 217 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 CSH2P0DML3 217 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 EEF1B2P24534 225 aaKnown RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 GDF1P27539 372 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 DUTP33316 252 aaKnown RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 FEN1P39748 380 aaKnown RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 PEX3P56589 373 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 EVCP57679 992 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 BTG1P62324 171 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 POLR2LP62875 67 aaKnown RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 EPS8Q12929 822 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 EBI3Q14213 229 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 FASTKQ14296 549 aaKnown RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 PTPRCAPQ14761 206 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 RBBP7Q16576 425 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 ISXQ2M1V0 245 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 ZNF658BQ4V348 819 aaPredicted RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 SUSD4Q5VX71 490 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 REP15Q6BDI9 236 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 FAM180BQ6P0A1 224 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 TTC27Q6P3X3 843 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 MACC1Q6ZN28 852 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 CENPVQ7Z7K6 275 aaPredicted RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 LRP11Q86VZ4 500 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 NME8Q8N427 588 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 Q8N9L7 120 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 CCDC63Q8NA47 563 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 OR2L5Q8NG80 312 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 OR6F1Q8NGZ6 308 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 TEKT4Q8WW24 435 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 PTERQ96BW5 349 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 NXPE2Q96DL1 559 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 STARD4Q96DR4 205 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 ZBED6CLQ96FA7 236 aaPredicted RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms