RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 CLHC1Q8NHS4 586 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 UTP15Q8TED0 518 aaKnown RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 TEFMQ96QE5 360 aaKnown RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 MRGBPQ9NV56 204 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 IRAK4Q9NWZ3 460 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 BAIAP2L1Q9UHR4 511 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 MCM8Q9UJA3 840 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 MRPS2Q9Y399 296 aaKnown RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 CAPN7Q9Y6W3 813 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 GNG14A0A1W2PPG7 69 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 CCT8L1PA6NM43 557 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 AGRPO00253 132 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 TXNDC9O14530 226 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 ANXA4P09525 319 aaPredicted RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 PRPS2P11908 318 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 GPX3P22352 226 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 TPP2P29144 1249 aaPredicted RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 MRPL19P49406 292 aaKnown RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 IRX1P78414 480 aaPredicted RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 ZFP36L1Q07352 338 aaKnown RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 TGM3Q08188 693 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 COL9A2Q14055 689 aaPredicted RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 TRIP6Q15654 476 aaKnown RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 PDCD4Q53EL6 469 aaKnown RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 TCTE1Q5JU00 501 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 ZNF793Q6ZN11 406 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 RBM44Q6ZP01 1051 aaKnown RBP19.47■□□□□ 0.71
CHKB-201ENST00000406938 RIPOR1Q6ZS17 1223 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 ABHD13Q7L211 337 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 DEFB124Q8NES8 71 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 OR9I1Q8NGQ6 314 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 TSSK3Q96PN8 268 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 RAPGEFL1Q9UHV5 662 aa19.47■□□□□ 0.71
CHKB-201ENST00000406938 CAPN14A8MX76 684 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 PSMD12O00232 456 aaPredicted RBP19.46■□□□□ 0.71
CHKB-201ENST00000406938 EBAG9O00559 213 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 B3GALT4O96024 378 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 ARFIP1P53367 373 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 KLF10Q13118 480 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 TRA2AQ13595 282 aaKnown RBP eCLIP19.46■□□□□ 0.71
CHKB-201ENST00000406938 FAM91A1Q658Y4 838 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 PAOXQ6QHF9 649 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 GLRX5Q86SX6 157 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 TREML1Q86YW5 311 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 ARHGEF39Q8N4T4 335 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 OR8K5Q8NH50 307 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 TBCDQ9BTW9 1192 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 ACTL8Q9H568 366 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 DDX31Q9H8H2 851 aaKnown RBP19.46■□□□□ 0.71
CHKB-201ENST00000406938 PRDM7Q9NQW5 492 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 FGF21Q9NSA1 209 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 ADAM29Q9UKF5 820 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 PCDHGA1Q9Y5H4 931 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 ZNF292O60281 2723 aa19.46■□□□□ 0.71
CHKB-201ENST00000406938 COL27A1Q8IZC6 1860 aaPredicted RBP19.45■□□□□ 0.7
CHKB-201ENST00000406938 ARHGAP10A1A4S6 786 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 H3BMH7 237 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 ANKRD28O15084 1053 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 SLC22A2O15244 555 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 SMIM10L1P0DMW3 83 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 HIST1H1TP22492 207 aaPredicted RBP19.45■□□□□ 0.7
CHKB-201ENST00000406938 PIK3R1P27986 724 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 TSFMP43897 325 aaKnown RBP19.45■□□□□ 0.7
CHKB-201ENST00000406938 UFM1P61960 85 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 E2F1Q01094 437 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 INSM1Q01101 510 aaPredicted RBP19.45■□□□□ 0.7
CHKB-201ENST00000406938 ZNF763Q0D2J5 394 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 DEFB134Q4QY38 66 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 CCNYL2Q5T2Q4 361 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 AMER3Q8N944 861 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 OR1L3Q8NH93 324 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 CDC26Q8NHZ8 85 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 SMIM10Q96HG1 83 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 EGLN2Q96KS0 407 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 TEX37Q96LM6 180 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 QRFPRQ96P65 431 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 SPRTNQ9H040 489 aaPredicted RBP19.45■□□□□ 0.7
CHKB-201ENST00000406938 FANCEQ9HB96 536 aa19.45■□□□□ 0.7
CHKB-201ENST00000406938 A0A0A6YYD5 115 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 FITM1A5D6W6 292 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 TMPRSS11DO60235 418 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 OR2B3O76000 313 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 KLHL18O94889 574 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 CD1EP15812 388 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 ALOX12P18054 663 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 ATP5A1P25705 553 aaKnown RBP19.44■□□□□ 0.7
CHKB-201ENST00000406938 CERS1P27544 350 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 ADSLP30566 484 aaPredicted RBP19.44■□□□□ 0.7
CHKB-201ENST00000406938 MAPK12P53778 367 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 BTN3A2P78410 334 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 C16orf72Q14CZ0 275 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 KIAA2013Q8IYS2 634 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 PROKR1Q8TCW9 393 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 ZNF501Q96CX3 271 aaPredicted RBP19.44■□□□□ 0.7
CHKB-201ENST00000406938 C10orf90Q96M02 699 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 TMEM74Q96NL1 305 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 COPS7BQ9H9Q2 264 aaPredicted RBP19.44■□□□□ 0.7
CHKB-201ENST00000406938 ENAMQ9NRM1 1142 aa19.44■□□□□ 0.7
CHKB-201ENST00000406938 SIDT1Q9NXL6 827 aaKnown RBP19.44■□□□□ 0.7
CHKB-201ENST00000406938 ZIM2Q9NZV7 527 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms