RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 GK2Q14410 553 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 TMEM187Q14656 261 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 PPA1Q15181 289 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 FAM72AQ5TYM5 149 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 FAM72DQ6L9T8 149 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC27A4Q6P1M0 643 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 ARHGAP11AQ6P4F7 1023 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 TMEM64Q6YI46 380 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 NOTCH2NLQ7Z3S9 236 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 RABEPKQ7Z6M1 372 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 FAM72BQ86X60 149 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 FAM89BQ8N5H3 189 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 TEX26Q8N6G2 289 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR8H1Q8NGG4 311 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR10G8Q8NGN5 311 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR6S1Q8NH40 331 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SPATA18Q8TC71 538 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 ATP8B4Q8TF62 1192 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 TMEM190Q8WZ59 177 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC35C1Q96A29 364 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 UBAC1Q9BSL1 405 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF665Q9H7R5 613 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 PLCXD1Q9NUJ7 323 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 CACNG5Q9UF02 275 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 APPL1Q9UKG1 709 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 PILRAQ9UKJ1 303 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 ELF5Q9UKW6 265 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 PPP1R3CQ9UQK1 317 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 TDRKHQ9Y2W6 561 aaKnown RBP3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 KIAA1217Q5T5P2 1943 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 MYH14Q7Z406 1995 aaKnown RBP3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 GPRASP1Q5JY77 1395 aa3.38□□□□□ -1.87
HMGB1P17-201ENST00000403495 ARID2Q68CP9 1835 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 TMEM129A0AVI4 362 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 CCDC69A6NI79 296 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 ANHXE9PGG2 379 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 KHDRBS3O75525 346 aaKnown RBP3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF821O75541 412 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 GRAP2O75791 330 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 REC8O95072 547 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 CXCL14O95715 111 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 GAS8O95995 478 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 PTMSP20962 102 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 CTNNA2P26232 953 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR1D2P34982 312 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 MMP12P39900 470 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC1A3P43003 542 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR3A3P47888 321 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 SGCGQ13326 291 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 CEACAM7Q14002 265 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 KRT31Q15323 416 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 FGD3Q5JSP0 725 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 ADAMTSL4-AS1Q5T5F5 129 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 ATP1A1-AS1Q5TC04 95 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 LYPLAL1Q5VWZ2 237 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 PSRC1Q6PGN9 363 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 ISLR2Q6UXK2 745 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 C15orf52Q6ZUT6 534 aaKnown RBP3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 C1orf186Q6ZWK4 172 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 Q71RC1 249 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 ZNF329Q86UD4 541 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 CATSPERDQ86XM0 798 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 STHQ8IWL8 128 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC43A2Q8N370 569 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 RTL3Q8N8U3 475 aaKnown RBP3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 TRPV3Q8NET8 790 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR52E1Q8NGJ3 308 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 OR13C5Q8NGS8 318 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 PSMA8Q8TAA3 256 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 URGCPQ8TCY9 931 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 HAS2Q92819 552 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 ULK4Q96C45 1275 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 LRR1Q96L50 414 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 CXorf58Q96LI9 332 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 LITAFQ99732 161 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 CLEC7AQ9BXN2 247 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 TDRD1Q9BXT4 1180 aaKnown RBP3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 DGCR6LQ9BY27 220 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 NAPBQ9H115 298 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 WDR13Q9H1Z4 485 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 MAGEF1Q9HAY2 307 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 GPN1Q9HCN4 374 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 SPHK2Q9NRA0 654 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 EXOC1Q9NV70 894 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 ATAD3AQ9NVI7 634 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 WWOXQ9NZC7 414 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 TMEM181Q9P2C4 612 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 DBF4Q9UBU7 674 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 MAD2L2Q9UI95 211 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 TCF19Q9Y242 345 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 NPHP3Q7Z494 1330 aa3.37□□□□□ -1.87
HMGB1P17-201ENST00000403495 FAM149AA5PLN7 773 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 ATP6V1G1O75348 118 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 IGHEP01854 428 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC4A1P02730 911 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 VTNP04004 478 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 SELEP16581 610 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 ITGB6P18564 788 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 AADACP22760 399 aa3.36□□□□□ -1.87
HMGB1P17-201ENST00000403495 SLC6A12P48065 614 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms