RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 NIPAL2Q9H841 368 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 MEAF6Q9HAF1 191 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 GPN1Q9HCN4 374 aaPredicted RBP13.28□□□□□ -0.28
RUNX3-203ENST00000399916 FLRT1Q9NZU1 646 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 PCDHGB3Q9Y5G1 929 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 PCDHGA9Q9Y5G4 932 aaKnown RBP13.28□□□□□ -0.28
RUNX3-203ENST00000399916 ACPPP15309 386 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 TNFRSF1BP20333 461 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 GNPDA1P46926 289 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 CLINT1Q14677 625 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 DLK2Q6UY11 383 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 HSH2DQ96JZ2 352 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 FCRL4Q96PJ5 515 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 FEVQ99581 238 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 GPR21Q99679 349 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 IPPKQ9H8X2 491 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 ACOXLQ9NUZ1 547 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 ENOPH1Q9UHY7 261 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 SLX4Q8IY92 1834 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 UPK3BL1B0FP48 263 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 B4DXG7 233 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 UPK3BL2E5RIL1 263 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 TLX2O43763 284 aaPredicted RBP13.28□□□□□ -0.28
RUNX3-203ENST00000399916 HPRP00739 348 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 CYP17A1P05093 508 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 ZNF286BP0CG31 522 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 PRG2P13727 222 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 MATKP42679 507 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 ILF3Q12906 894 aaKnown RBP eCLIP13.28□□□□□ -0.28
RUNX3-203ENST00000399916 DPPA2Q7Z7J5 298 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 TCEANCQ8N8B7 351 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 REPS2Q8NFH8 660 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 RPLP0P6Q8NHW5 317 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 LRRC46Q96FV0 321 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 OR51J1Q9H342 316 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 TMEM185BQ9H7F4 350 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 UTS2RQ9UKP6 389 aa13.28□□□□□ -0.28
RUNX3-203ENST00000399916 TTC24A2A3L6 582 aaPredicted RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 IQCF5A8MTL0 148 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 UBFD1O14562 309 aaKnown RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ZNF197O14709 1029 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 UROSP10746 265 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ALDH9A1P49189 494 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ZNF280AP59817 542 aaPredicted RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 MBTD1Q05BQ5 628 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ATAT1Q5SQI0 421 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ZBTB37Q5TC79 503 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ADAMTSL2Q86TH1 951 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 TMEM17Q86X19 198 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 PXYLP1Q8TE99 480 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ADAMTS14Q8WXS8 1223 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 GMLQ99445 158 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 TREX2Q9BQ50 279 aaPredicted RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 OR10A4Q9H209 315 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 GOLGA2P5Q9HBQ8 144 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 FBXL3Q9UKT7 428 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ZNFX1Q9P2E3 1918 aaKnown RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 C2orf92A0A1B0GVN3 265 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 A0A1W2PPK0 400 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 FPGTO14772 594 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 LY86O95711 162 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 STAU1O95793 577 aaKnown RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 GPX3P22352 226 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 DNAJB1P25685 340 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ACSL1P33121 698 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 STEAP4Q687X5 459 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 CTU1Q7Z7A3 348 aaKnown RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 TSPYL5Q86VY4 417 aaPredicted RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 LSMEM2Q8N112 164 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ZNF615Q8N8J6 731 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 C9orf43Q8TAL5 461 aaPredicted RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 OR5M11Q96RB7 305 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 FZD8Q9H461 694 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 CATSPERBQ9H7T0 1116 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 LRTM1Q9HBL6 345 aa13.27□□□□□ -0.28
RUNX3-203ENST00000399916 ZNF334Q9HCZ1 680 aaPredicted RBP13.27□□□□□ -0.28
RUNX3-203ENST00000399916 CLTBP09497 229 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 USP17L7P0C7H9 530 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 IQCF3P0C7M6 154 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 CD6P30203 668 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 MAGEA3P43357 314 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 KIR3DL1P43629 444 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 GBX2P52951 348 aaPredicted RBP13.27□□□□□ -0.29
RUNX3-203ENST00000399916 ACSM2AQ08AH3 577 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 ACSM2BQ68CK6 577 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 DNERQ8NFT8 737 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 SLC35F5Q8WV83 523 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 DNASE1L2Q92874 299 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 UFD1Q92890 307 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 PKP4Q99569 1192 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 TLR8Q9NR97 1041 aaKnown RBP13.27□□□□□ -0.29
RUNX3-203ENST00000399916 GLS2Q9UI32 602 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 ZFR2Q9UPR6 939 aaKnown RBP13.27□□□□□ -0.29
RUNX3-203ENST00000399916 RLN2P04090 185 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 GABRB3P28472 473 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 ISL1P61371 349 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 HECTD3Q5T447 861 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 KHDRBS2Q5VWX1 349 aaKnown RBP13.27□□□□□ -0.29
RUNX3-203ENST00000399916 TMPRSS9Q7Z410 1059 aa13.27□□□□□ -0.29
RUNX3-203ENST00000399916 MIB1Q86YT6 1006 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms