RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ECHDC3Q96DC8 303 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 SMAD5Q99717 465 aaKnown RBP13.48□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF576Q9H609 170 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 AMBNQ9NP70 447 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 SCAMP2O15127 329 aaKnown RBP13.47□□□□□ -0.25
SCAF4-202ENST00000399804 SLCO2B1O94956 709 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 CTSLP07711 333 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 AK4P27144 223 aaPredicted RBP13.47□□□□□ -0.25
SCAF4-202ENST00000399804 PIK3CBP42338 1070 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 OR1E2P47887 323 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 CENPAP49450 140 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 NCF4Q15080 339 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 FAM20CQ8IXL6 584 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 PRSS58Q8IYP2 241 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 RNF168Q8IYW5 571 aaPredicted RBP13.47□□□□□ -0.25
SCAF4-202ENST00000399804 DNASE1L2Q92874 299 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 TADA1Q96BN2 335 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 ABHD8Q96I13 439 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 MYADMQ96S97 322 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 OBP2AQ9NY56 170 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 C5AR2Q9P296 337 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 CA5BQ9Y2D0 317 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 MYOCOSA0A1B0GUC4 107 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 OR6C74A6NCV1 312 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 ARNTLO00327 626 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 MYL12AP19105 171 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 PAICSP22234 425 aaKnown RBP13.47□□□□□ -0.25
SCAF4-202ENST00000399804 HNRNPA2B1P22626 353 aaKnown RBP13.47□□□□□ -0.25
SCAF4-202ENST00000399804 LARS2Q15031 903 aaKnown RBP13.47□□□□□ -0.25
SCAF4-202ENST00000399804 TMEM151AQ8N4L1 468 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 KCT2Q8NC54 265 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 GTF2H4Q92759 462 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 RPF2Q9H7B2 306 aaKnown RBP13.47□□□□□ -0.25
SCAF4-202ENST00000399804 FBRSQ9HAH7 460 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 COMMD3-BMI1R4GMX3 469 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 TRBV5-4A0A0C4DH59 114 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 SNAP29O95721 258 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 ALDH3A2P51648 485 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 TAP2Q03519 686 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 ATP6AP1Q15904 470 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF630Q2M218 657 aaPredicted RBP13.47□□□□□ -0.25
SCAF4-202ENST00000399804 UGT3A2Q3SY77 523 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 ENPP6Q6UWR7 440 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF730Q6ZMV8 503 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 LMX1AQ8TE12 382 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 C16orf78Q8WTQ4 265 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF347Q96SE7 839 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 CNPPD1Q9BV87 410 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 ANKHQ9HCJ1 492 aa13.47□□□□□ -0.25
SCAF4-202ENST00000399804 CCNB2O95067 398 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 IL7RP16871 459 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 KHKP50053 298 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 IST1P53990 364 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 MC1RQ01726 317 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 ID2Q02363 134 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 SLAMF1Q13291 335 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 DEFB134Q4QY38 66 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 KHDRBS2Q5VWX1 349 aaKnown RBP13.46□□□□□ -0.25
SCAF4-202ENST00000399804 TMEM215Q68D42 235 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 OR52E8Q6IFG1 317 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 GALNT18Q6P9A2 607 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 PLA2G15Q8NCC3 412 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 OR10G2Q8NGC3 310 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 OR8K5Q8NH50 307 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 NUDT8Q8WV74 236 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 MYDGFQ969H8 173 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 SHDQ96IW2 340 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 SORBS1Q9BX66 1292 aaKnown RBP13.46□□□□□ -0.25
SCAF4-202ENST00000399804 MAT2BQ9NZL9 334 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 P2RX2Q9UBL9 471 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF229Q9UJW7 825 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 SCML1Q9UN30 329 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 DMTF1Q9Y222 760 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 C17orf113A0A1B0GUU1 675 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 ETFAP13804 333 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 GGT1P19440 569 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 OXTRP30559 389 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 RYKP34925 604 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 RPS26P62854 115 aaKnown RBP13.46□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF33BQ06732 778 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF155Q12901 538 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-202ENST00000399804 AHSA2Q719I0 299 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF551Q7Z340 670 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-202ENST00000399804 ZCCHC7Q8N3Z6 543 aaKnown RBP13.46□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF740Q8NDX6 193 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 EZH1Q92800 747 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-202ENST00000399804 MAL2Q969L2 176 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF707Q96C28 371 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-202ENST00000399804 TMEM45AQ9NWC5 275 aa13.46□□□□□ -0.25
SCAF4-202ENST00000399804 MYL12BO14950 172 aa13.46□□□□□ -0.26
SCAF4-202ENST00000399804 PSMB5P28074 263 aa13.46□□□□□ -0.26
SCAF4-202ENST00000399804 PXNP49023 591 aaPredicted RBP13.46□□□□□ -0.26
SCAF4-202ENST00000399804 CDK9P50750 372 aaKnown RBP13.46□□□□□ -0.26
SCAF4-202ENST00000399804 METAP1P53582 386 aa13.46□□□□□ -0.26
SCAF4-202ENST00000399804 EPHA5P54756 1037 aa13.46□□□□□ -0.26
SCAF4-202ENST00000399804 ABATP80404 500 aa13.46□□□□□ -0.26
SCAF4-202ENST00000399804 C16orf72Q14CZ0 275 aa13.46□□□□□ -0.26
SCAF4-202ENST00000399804 ABHD13Q7L211 337 aa13.46□□□□□ -0.26
SCAF4-202ENST00000399804 LGI4Q8N135 537 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms