RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 VTI1BQ9UEU0 232 aa16.61■□□□□ 0.25
SMIM11A-202ENST00000399295 EBAG9O00559 213 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 CCNT2O60583 730 aaKnown RBP16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 CNOT3O75175 753 aaKnown RBP16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 RPS17P08708 135 aaKnown RBP16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 SLC35G6P0C7Q6 338 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 C1GALT1C1LP0DN25 315 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 CXCR2P25025 360 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 EEF1DP29692 281 aaKnown RBP16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 FOLR3P41439 243 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 CCR10P46092 362 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 SCTRP47872 440 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 RPL14P50914 215 aaKnown RBP16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 REEP5Q00765 189 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 FAM53BQ14153 422 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 LINC00303Q3SY05 128 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 UNC50Q53HI1 259 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 ATG9BQ674R7 924 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 SLCO4C1Q6ZQN7 724 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 COX15Q7KZN9 410 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 OR2Y1Q8NGV0 311 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 UBTD2Q8WUN7 234 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 THAP4Q8WY91 577 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 FAR2Q96K12 515 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 BBC3Q96PG8 261 aaPredicted RBP16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 SPNS1Q9H2V7 528 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 ZNF395Q9H8N7 513 aaPredicted RBP16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 TUBD1Q9UJT1 453 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 USH1CQ9Y6N9 552 aa16.6■□□□□ 0.25
SMIM11A-202ENST00000399295 CLGNO14967 610 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 NDUFS4O43181 175 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 FOXS1O43638 330 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 MLYCDO95822 493 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 SERPIND1P05546 499 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 FBLP22087 321 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 AHRP35869 848 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 AVPR1BP47901 424 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 PIK3CGP48736 1102 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 AGTR2P50052 363 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 ARFIP2P53365 341 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 PWP1Q13610 501 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 DSG2Q14126 1118 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 RBBP5Q15291 538 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 NKG7Q16617 165 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 TMEM214Q6NUQ4 689 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 LRRC70Q7Z2Q7 622 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 ADAMTS17Q8TE56 1095 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 ZNF483Q8TF39 744 aaPredicted RBP16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 APOBEC4Q8WW27 367 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 STON2Q8WXE9 905 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 MMABQ96EY8 250 aaPredicted RBP16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 SLC26A1Q9H2B4 701 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 WDR54Q9H977 334 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 CTSFQ9UBX1 484 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 ZFP69BQ9UJL9 534 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 MAN2B2Q9Y2E5 1009 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 MRPS2Q9Y399 296 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 ATMQ13315 3056 aa16.59■□□□□ 0.25
SMIM11A-202ENST00000399295 A0A0A6YYC8 382 aaPredicted RBP16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 I3L1I5 382 aaPredicted RBP16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 CHRNGP07510 517 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 ALOX15P16050 662 aaPredicted RBP16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 ARRB2P32121 409 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 OTX2P32243 289 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 FOXL2P58012 376 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 CLCQ05315 142 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 RGS1Q08116 209 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 LCP2Q13094 533 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 SLBPQ14493 270 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 SSPNQ14714 243 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 RAB43Q86YS6 212 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 ZNF781Q8N8C0 355 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 KCT2Q8NC54 265 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 C10orf82Q8WW14 230 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 MOCOSQ96EN8 888 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 EHD1Q9H4M9 534 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 GEMIN8Q9NWZ8 242 aaKnown RBP16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 OPTCQ9UBM4 332 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 ZNF282Q9UDV7 671 aaPredicted RBP16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 NXT1Q9UKK6 140 aaKnown RBP16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 PCTPQ9UKL6 214 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 ASB1Q9Y576 335 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 KCNMB2Q9Y691 235 aa16.58■□□□□ 0.24
SMIM11A-202ENST00000399295 ATRXP46100 2492 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 A0A0G2JND7 137 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 K7EPI3 171 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 DCTN3O75935 186 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 SIX3O95343 332 aaPredicted RBP16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 FAM87AP0C7U9 286 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 OCA2Q04671 838 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 LY6DQ14210 128 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 ZSCAN26Q16670 478 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 XKR6Q5GH73 641 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 TMIGD1Q6UXZ0 262 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 ZNF771Q7L3S4 317 aaPredicted RBP16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 CUZD1Q86UP6 607 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 KRT78Q8N1N4 520 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 ANKRD53Q8N9V6 530 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 TRPV3Q8NET8 790 aa16.57■□□□□ 0.24
SMIM11A-202ENST00000399295 OR9A4Q8NGU2 314 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms