RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 INCA1Q0VD86 236 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 LAPTM4AQ15012 233 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 DENND2DQ9H6A0 471 aaPredicted RBP10.96□□□□□ -0.65
TTC28-201ENST00000397906 TP53I11O14683 189 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 AHCYL1O43865 530 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 SOCS5O75159 536 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 CD9P21926 228 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 OR2B6P58173 313 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 PITX1P78337 314 aaPredicted RBP10.96□□□□□ -0.65
TTC28-201ENST00000397906 CMASQ8NFW8 434 aaPredicted RBP10.96□□□□□ -0.65
TTC28-201ENST00000397906 KCNK13Q9HB14 408 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 B4GALT7Q9UBV7 327 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 SYT16Q17RD7 645 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 NPAS3Q8IXF0 933 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 SLC35B2Q8TB61 432 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 PSKH2Q96QS6 385 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 SMURF2Q9HAU4 748 aa10.96□□□□□ -0.65
TTC28-201ENST00000397906 KAT6AQ92794 2004 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 OR12D1P0DN82 309 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 AOC1P19801 751 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 CDK6Q00534 326 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 LRRC58Q96CX6 371 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 WDR45Q9Y484 360 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 GSRP00390 522 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 CTBP2P56545 445 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 NSDHLQ15738 373 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 OR52B2Q96RD2 323 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 LGALS13Q9UHV8 139 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 ZNF217O75362 1048 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 POU6F2P78424 691 aaPredicted RBP10.96□□□□□ -0.66
TTC28-201ENST00000397906 ACSBG2Q5FVE4 666 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 MFSD2AQ8NA29 543 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 COQ10BQ9H8M1 238 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 ERVK-18Q9QC07 812 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 DNAJB9Q9UBS3 223 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 ZNF639Q9UID6 485 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 PCDHB14Q9Y5E9 798 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 SRPRAP08240 638 aaKnown RBP10.96□□□□□ -0.66
TTC28-201ENST00000397906 TBPL1P62380 186 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 PRKCDQ05655 676 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 SLAMF1Q13291 335 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 CLLU1OSQ5K130 101 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 SHISA6Q6ZSJ9 500 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 FANK1Q8TC84 345 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 DPH7Q9BTV6 452 aa10.96□□□□□ -0.66
TTC28-201ENST00000397906 CAPN5O15484 640 aaPredicted RBP10.95□□□□□ -0.66
TTC28-201ENST00000397906 ITGB1P05556 798 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 DNASE1L3Q13609 305 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 OR5K1Q8NHB7 308 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 HPS1Q92902 700 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 SMIM30A4D0T7 59 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 TOR1BO14657 336 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 OCLNQ16625 522 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 OR8K3Q8NH51 312 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 C1orf74Q96LT6 269 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 DLX3O60479 287 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 ZNF806P0C7X5 589 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 AQP4P55087 323 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 PLP2Q04941 152 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 PLET1Q6UQ28 207 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.95□□□□□ -0.66
TTC28-201ENST00000397906 SDR16C5Q8N3Y7 309 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 OR9I1Q8NGQ6 314 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 ZBTB20Q9HC78 741 aaPredicted RBP10.95□□□□□ -0.66
TTC28-201ENST00000397906 RARRES3Q9UL19 164 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 MSS51Q4VC12 460 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 FOXJ1Q92949 421 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 ZNF395Q9H8N7 513 aaPredicted RBP10.95□□□□□ -0.66
TTC28-201ENST00000397906 PDE10AQ9Y233 779 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 OAZ2O95190 189 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 ADRB3P13945 408 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 PMS2P3Q13401 168 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 OR4N5Q8IXE1 308 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 CCDC88AQ3V6T2 1871 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 PRAMEF33A0A0G2JMD5 474 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 PRAMEF10O60809 474 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 ARPC4P59998 168 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 WDR5P61964 334 aaKnown RBP10.95□□□□□ -0.66
TTC28-201ENST00000397906 YTHDF3Q7Z739 585 aaKnown RBP10.95□□□□□ -0.66
TTC28-201ENST00000397906 ADGRD2Q7Z7M1 963 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 PLEKHO2Q8TD55 490 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 IRF2BPLQ9H1B7 796 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 MTG2Q9H4K7 406 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 FNIP2Q9P278 1114 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 C5AR1P21730 350 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 HADHBP55084 474 aaKnown RBP10.95□□□□□ -0.66
TTC28-201ENST00000397906 ST3GAL3Q11203 375 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 C4orf46Q504U0 113 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 TMPPEQ6ZT21 453 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 TSPAN33Q86UF1 283 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 CSNK1A1LQ8N752 337 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 CGREF1Q99674 301 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 SLC17A9Q9BYT1 436 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 TMED5Q9Y3A6 229 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 ITGA10O75578 1167 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 PLXDC1Q8IUK5 500 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 MSLNLQ96KJ4 702 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 CNDP2Q96KP4 475 aaKnown RBP10.95□□□□□ -0.66
TTC28-201ENST00000397906 CD180Q99467 661 aa10.95□□□□□ -0.66
TTC28-201ENST00000397906 FARSAQ9Y285 508 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms