RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 OR7A17O14581 309 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 CHST10O43529 356 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 SH3BGRLO75368 114 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 BMP10O95393 424 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 TGFB1P01137 390 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 RPS17P08708 135 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 IMPDH1P20839 514 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 IL10P22301 178 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 HNRNPH1P31943 449 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 CDH13P55290 713 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 KCNAB2Q13303 367 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 E2F2Q14209 437 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 FAAH2Q6GMR7 532 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 ADNP2Q6IQ32 1131 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 VN1R5Q7Z5H4 357 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 APLFQ8IW19 511 aaPredicted RBP23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 ZC3H7AQ8IWR0 971 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 SRRM1Q8IYB3 904 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 EXD3Q8N9H8 876 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 SRFBP1Q8NEF9 429 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 OR2L5Q8NG80 312 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 OR5T3Q8NGG3 340 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 ZNF473Q8WTR7 871 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 METTL21AQ8WXB1 218 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 CMTM7Q96FZ5 175 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 CDK15Q96Q40 435 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 F2RL3Q96RI0 385 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 CENPKQ9BS16 269 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 TMEM109Q9BVC6 243 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 ADNPQ9H2P0 1102 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 CLK4Q9HAZ1 481 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 G3BP2Q9UN86 482 aaKnown RBP23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 SCN2AQ99250 2005 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 FAM208BQ5VWN6 2430 aa23.99■■□□□ 1.43
TSPAN4-207ENST00000397411 ITPR1Q14643 2758 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 MKRN2OSH3BPM6 223 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 AGPSO00116 658 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 PSMD12O00232 456 aaPredicted RBP23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 OTCP00480 354 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 SMIM10L1P0DMW3 83 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 TSPAN8P19075 237 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 PRKAA2P54646 552 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 SLC18A2Q05940 514 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 CPZQ66K79 652 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 RPS27LQ71UM5 84 aaKnown RBP23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 TRABD2AQ86V40 505 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 L3MBTL4Q8NA19 623 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 CLEC1AQ8NC01 280 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 OR52B6Q8NGF0 335 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 TRPC4APQ8TEL6 797 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 ZNF483Q8TF39 744 aaPredicted RBP23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 SMIM10Q96HG1 83 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 MAGEB10Q96LZ2 347 aaPredicted RBP23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 NTMT1Q9BV86 223 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 EMCNQ9ULC0 261 aa23.98■■□□□ 1.43
TSPAN4-207ENST00000397411 A6NL46 340 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 B3GALT2O43825 422 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 JRKO75564 520 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 PROCP04070 461 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 CLCQ05315 142 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 ZRSR2Q15696 482 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 TMEM35AQ53FP2 167 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 UNC50Q53HI1 259 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 SOWAHCQ53LP3 525 aaPredicted RBP23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 ZNF678Q5SXM1 525 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 PCSK4Q6UW60 755 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 ZYG11AQ6WRX3 759 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 CCNYL1Q8N7R7 359 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 HUS1BQ8NHY5 278 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 MTFMTQ96DP5 389 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 BBC3Q96PG8 261 aaPredicted RBP23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 SMC6Q96SB8 1091 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 MTERF1Q99551 399 aaKnown RBP23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 RBCK1Q9BYM8 510 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 CENPHQ9H3R5 247 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 ZBTB26Q9HCK0 441 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 ATP13A2Q9NQ11 1180 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 MID2Q9UJV3 735 aa23.97■■□□□ 1.43
TSPAN4-207ENST00000397411 H0YIV9 168 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 RGS16O15492 202 aaPredicted RBP23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 PLIN3O60664 434 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 DNAJB5O75953 348 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 RNH1P13489 461 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 CPA3P15088 417 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 ACPPP15309 386 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 PIK3CBP42338 1070 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 RAP1GDS1P52306 607 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 AP5B1Q2VPB7 878 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 TUBB8Q3ZCM7 444 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 OR4F6Q8NGB9 312 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 RDH11Q8TC12 318 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 TBC1D20Q96BZ9 403 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 TMEM237Q96Q45 408 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 OR1F2PQ96R84 312 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 C1QTNF3Q9BXJ4 246 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 MS4A8Q9BY19 250 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 TRIM55Q9BYV6 548 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 ROGDIQ9GZN7 287 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 AICDAQ9GZX7 198 aa23.96■■□□□ 1.43
TSPAN4-207ENST00000397411 FBXL4Q9UKA2 621 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms