RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SETDB1Q15047 1291 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 INAQ16352 499 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 SLC5A12Q1EHB4 618 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 C18orf21Q32NC0 220 aaPredicted RBP12.99□□□□□ -0.33
SEC13-205ENST00000397101 NKAIN1Q4KMZ8 207 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 IRAK1BP1Q5VVH5 260 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 ATG16L1Q676U5 607 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 TTC19Q6DKK2 380 aaPredicted RBP12.99□□□□□ -0.33
SEC13-205ENST00000397101 MTFR2Q6P444 385 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 ZCCHC23Q6ZST2 131 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 ADGRF3Q8IZF5 1079 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 ZNF808Q8N4W9 903 aaPredicted RBP12.99□□□□□ -0.33
SEC13-205ENST00000397101 PPFIBP2Q8ND30 876 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 ATP6V1E2Q96A05 226 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 VPS50Q96JG6 964 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 LMF1Q96S06 567 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 LHPPQ9H008 270 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 WDR54Q9H977 334 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 FAM60AQ9NP50 221 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 TXLNGQ9NUQ3 528 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 FAM53CQ9NYF3 392 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 OPTCQ9UBM4 332 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 SUCOQ9UBS9 1254 aaKnown RBP12.99□□□□□ -0.33
SEC13-205ENST00000397101 PTBP2Q9UKA9 531 aaKnown RBP12.99□□□□□ -0.33
SEC13-205ENST00000397101 ANKRD12Q6UB98 2062 aa12.99□□□□□ -0.33
SEC13-205ENST00000397101 SETD2Q9BYW2 2564 aaPredicted RBP12.99□□□□□ -0.33
SEC13-205ENST00000397101 CNTRLQ7Z7A1 2325 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 LRRC14BA6NHZ5 514 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 MASP2O00187 686 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 H2AFYO75367 372 aaKnown RBP12.98□□□□□ -0.33
SEC13-205ENST00000397101 STK16O75716 305 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 SIX3O95343 332 aaPredicted RBP12.98□□□□□ -0.33
SEC13-205ENST00000397101 DHRS4L1P0CG22 281 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 PVRP15151 417 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 IMPDH1P20839 514 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 IMPA1P29218 277 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 SHMT2P34897 504 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 MDH1P40925 334 aaKnown RBP12.98□□□□□ -0.33
SEC13-205ENST00000397101 GDF5P43026 501 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 GCGRP47871 477 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 AGTR2P50052 363 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 RAB28P51157 221 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 TDGF1P3P51864 188 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 DNAJB13P59910 316 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 GUCY1A3Q02108 690 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 STX3Q13277 289 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 TESK1Q15569 626 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 RBBP7Q16576 425 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.98□□□□□ -0.336e-6■□□□□ 8.6
SEC13-205ENST00000397101 ZNF678Q5SXM1 525 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 C1orf189Q5VU69 101 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 CAPN13Q6MZZ7 669 aaPredicted RBP12.98□□□□□ -0.33
SEC13-205ENST00000397101 RPTNQ6XPR3 784 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 SPNS3Q6ZMD2 512 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 PARP9Q8IXQ6 854 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 TEX9Q8N6V9 391 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 LMNTD1Q8N9Z9 388 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 ZNF480Q8WV37 535 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 PYCR2Q96C36 320 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 CD244Q9BZW8 370 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 SPRTNQ9H040 489 aaPredicted RBP12.98□□□□□ -0.33
SEC13-205ENST00000397101 SLC26A1Q9H2B4 701 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 MANSC1Q9H8J5 431 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 CCDC177Q9NQR7 707 aaPredicted RBP12.98□□□□□ -0.33
SEC13-205ENST00000397101 ENAMQ9NRM1 1142 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 DHCR7Q9UBM7 475 aaKnown RBP12.98□□□□□ -0.33
SEC13-205ENST00000397101 FBXL4Q9UKA2 621 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 DYRK1BQ9Y463 629 aa12.98□□□□□ -0.33
SEC13-205ENST00000397101 NF1P21359 2839 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 ISM1B1AKI9 464 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 SOCS6O14544 535 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 TAPBPO15533 448 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 KLK8O60259 260 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 HSPA4LO95757 839 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 SERPINE1P05121 402 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 PIM1P11309 404 aaPredicted RBP12.97□□□□□ -0.33
SEC13-205ENST00000397101 PKLRP30613 574 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 HERVK_113P63132 956 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 MFAP5Q13361 173 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 FASTKQ14296 549 aaKnown RBP12.97□□□□□ -0.33
SEC13-205ENST00000397101 GRB7Q14451 532 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 ARHGAP19Q14CB8 494 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 SUSD1Q6UWL2 747 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 ISLR2Q6UXK2 745 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 OR2L8Q8NGY9 312 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 CKAP2Q8WWK9 683 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 SMPDL3AQ92484 453 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 NR4A3Q92570 626 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 MAGEB18Q96M61 343 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 TMEM237Q96Q45 408 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 TMEM79Q9BSE2 394 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 NDC1Q9BTX1 674 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 GATA5Q9BWX5 397 aaPredicted RBP12.97□□□□□ -0.33
SEC13-205ENST00000397101 ERVK-6Q9BXR3 956 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 TRIM8Q9BZR9 551 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 SLC22A11Q9NSA0 550 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 DNAJC11Q9NVH1 559 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 NXT1Q9UKK6 140 aaKnown RBP12.97□□□□□ -0.33
SEC13-205ENST00000397101 ICKQ9UPZ9 632 aa12.97□□□□□ -0.33
SEC13-205ENST00000397101 SLC22A14Q9Y267 594 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms