RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ABRQ12979 859 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 MMEL1Q495T6 779 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 COQ5Q5HYK3 327 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 C6orf136Q5SQH8 315 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 SCIMPQ6UWF3 145 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 TMEM26Q6ZUK4 368 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 KLHDC8AQ8IYD2 350 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 SNX31Q8N9S9 440 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 ROPN1LQ96C74 230 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 CCDC124Q96CT7 223 aaKnown RBP16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 OR52A5Q9H2C5 316 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 S100A14Q9HCY8 104 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 ZNF624Q9P2J8 865 aaPredicted RBP16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 NDUFAF1Q9Y375 327 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 CCL27Q9Y4X3 112 aa16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 SPENQ96T58 3664 aaKnown RBP16.72■□□□□ 0.27
TNFSF13-205ENST00000396545 ARHGEF33A8MVX0 844 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 IFRD1O00458 451 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 PRKAR1AP10644 381 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 ANPEPP15144 967 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 ACADLP28330 430 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 PDHA2P29803 388 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 HMOX2P30519 316 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 STAT5AP42229 794 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 ZFP36L2P47974 494 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 DIO3P55073 304 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 MAP7Q14244 749 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 NFE2L1Q14494 772 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 ZXDCQ2QGD7 858 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 SMU1Q2TAY7 513 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 PLA2G4EQ3MJ16 856 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 BLOC1S3Q6QNY0 202 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 PTRH1Q86Y79 214 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 PHC3Q8NDX5 983 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 STARD8Q92502 1023 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 SLC29A3Q9BZD2 475 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 ZIM2Q9NZV7 527 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 FAM8A1Q9UBU6 413 aa16.71■□□□□ 0.27
TNFSF13-205ENST00000396545 LSM1O15116 133 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 TOX3O15405 576 aaPredicted RBP16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 UBXN7O94888 489 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 C1orf105O95561 183 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 CAPN3P20807 821 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 ME2P23368 584 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 HSD17B2P37059 387 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 SLC19A1P41440 591 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 EMX2Q04743 252 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 ABRAXAS2Q15018 415 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 GGTA1PQ4G0N0 100 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 ATP6AP1LQ52LC2 224 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 CRTC2Q53ET0 693 aaPredicted RBP16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 ICE2Q659A1 982 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 LRRC74BQ6ZQY2 392 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 RETREG3Q86VR2 466 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 ESX1Q8N693 406 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 LILRA3Q8N6C8 439 aaPredicted RBP16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 PCYOX1LQ8NBM8 494 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 NRG4Q8WWG1 115 aa16.7■□□□□ 0.26
TNFSF13-205ENST00000396545 E7ENX8 843 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 NR5A2O00482 541 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 CFLARO15519 480 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 VIPP01282 170 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 TYRP1P17643 537 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 VHLP40337 213 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 ARL1P40616 181 aaPredicted RBP16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 MC1RQ01726 317 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 RCAN2Q14206 197 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 RPS6KA2Q15349 733 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 ABRAXAS1Q6UWZ7 409 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 TRIM46Q7Z4K8 759 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 TRIM48Q8IWZ4 208 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 RAD51AP1Q96B01 352 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 GPATCH1Q9BRR8 931 aaKnown RBP16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 ULBP3Q9BZM4 244 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 POT1Q9NUX5 634 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 MAP10Q9P2G4 905 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 SUCOQ9UBS9 1254 aaKnown RBP16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 CROTQ9UKG9 612 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 LRRC42Q9Y546 428 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 DOPEY2Q9Y3R5 2298 aa16.69■□□□□ 0.26
TNFSF13-205ENST00000396545 PDZK1P1A8MUH7 402 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 SLC28A1O00337 649 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 ACOT8O14734 319 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 SLC35G4P0C7Q5 338 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 ZNF28P17035 718 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 IDSP22304 550 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 CAPZBP47756 277 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 FOXM1Q08050 763 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 CMPK2Q5EBM0 449 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 WASH2PQ6VEQ5 465 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 DCUN1D3Q8IWE4 304 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 OR9A1PQ8NGU1 263 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 C9orf43Q8TAL5 461 aaPredicted RBP16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 APOBEC4Q8WW27 367 aaKnown RBP16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 TFGQ92734 400 aaPredicted RBP16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 PPP3R2Q96LZ3 170 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 TGM7Q96PF1 710 aa16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 TACO1Q9BSH4 297 aaKnown RBP16.68■□□□□ 0.26
TNFSF13-205ENST00000396545 ZNF768Q9H5H4 540 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms