RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 GRSF1Q12849 480 aaKnown RBP eCLIP14.3□□□□□ -0.12
CBX3-202ENST00000396386 SPIDRQ14159 915 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 TEAD4Q15561 434 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 UAP1L1Q3KQV9 507 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 GALNT10Q86SR1 603 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 FAM124AQ86V42 546 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 HIPK1Q86Z02 1210 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.3□□□□□ -0.12
CBX3-202ENST00000396386 C11orf65Q8NCR3 313 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 PJA1Q8NG27 643 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 OR10Q1Q8NGQ4 319 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 SCARF2Q96GP6 870 aaPredicted RBP14.3□□□□□ -0.12
CBX3-202ENST00000396386 HSH2DQ96JZ2 352 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 PRAP1Q96NZ9 151 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 QRFPRQ96P65 431 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 OR2M4Q96R27 311 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 RAD21L1Q9H4I0 556 aa14.3□□□□□ -0.12
CBX3-202ENST00000396386 IFT80Q9P2H3 777 aaPredicted RBP14.3□□□□□ -0.12
CBX3-202ENST00000396386 FAF1Q9UNN5 650 aaPredicted RBP14.3□□□□□ -0.12
CBX3-202ENST00000396386 WBP11Q9Y2W2 641 aaKnown RBP14.3□□□□□ -0.12
CBX3-202ENST00000396386 CAPN5O15484 640 aaPredicted RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 OR6B1O95007 311 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 TBX6O95947 436 aaPredicted RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 NTRK1P04629 796 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 FABP3P05413 133 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 DDX5P17844 614 aaKnown RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 LTBRP36941 435 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 CSNK1G2P78368 415 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 SFSWAPQ12872 951 aaKnown RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 CLCA4Q14CN2 919 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 MPEG1Q2M385 716 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 ZIK1Q3SY52 487 aaPredicted RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 ADCK2Q7Z695 626 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 NUDT13Q86X67 352 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 DENND6BQ8NEG7 585 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 OR52N2Q8NGI0 321 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 ZFP28Q8NHY6 868 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 TBC1D20Q96BZ9 403 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 F2RL3Q96RI0 385 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 ZNF717Q9BY31 904 aaPredicted RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 TOR3AQ9H497 397 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 XKR8Q9H6D3 395 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 C8orf33Q9H7E9 229 aaPredicted RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 SMURF2Q9HAU4 748 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 FGF22Q9HCT0 170 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 TM9SF3Q9HD45 589 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 IL1RAPQ9NPH3 570 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 TUBA8Q9NY65 449 aaPredicted RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 TAS2R9Q9NYW1 312 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 A0A087WXM4 84 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 A0A1W2PRB8 838 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 PRSS38A1L453 326 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 OR1F1O43749 312 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 KDM1AO60341 852 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 HOXC4P09017 264 aaPredicted RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 NUDT7P0C024 238 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 ACADMP11310 421 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 SOAT1P35610 550 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 BSGP35613 385 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 PEX19P40855 299 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 CRATP43155 626 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 GSTM5P46439 218 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 PRDX1Q06830 199 aaKnown RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 FADDQ13158 208 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 C16orf72Q14CZ0 275 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 GCNT6Q5T4J0 391 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 OR2T5Q6IEZ7 315 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 SHQ1Q6PI26 577 aaKnown RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 KIAA1324Q6UXG2 1013 aaKnown RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 RBM44Q6ZP01 1051 aaKnown RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 HS3ST5Q8IZT8 346 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 SMRP1Q8NCR6 262 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 OR52E1Q8NGJ3 308 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 OR2T29Q8NH02 315 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 GABARAPL1Q9H0R8 117 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 TRPV5Q9NQA5 729 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 ADPRHL2Q9NX46 363 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 TAAR2Q9P1P5 351 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 BAG5Q9UL15 447 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 ABCG2Q9UNQ0 655 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 ICKQ9UPZ9 632 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 DMTF1Q9Y222 760 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 HEBP2Q9Y5Z4 205 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 MYO9BQ13459 2157 aa14.29□□□□□ -0.12
CBX3-202ENST00000396386 NUP214P35658 2090 aaPredicted RBP14.29□□□□□ -0.12
CBX3-202ENST00000396386 OR52A4PA6NMU1 304 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 RTCAO00442 366 aaKnown RBP14.28□□□□□ -0.12
CBX3-202ENST00000396386 TBX19O60806 448 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 BMP10O95393 424 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 DDCP20711 480 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 CHI3L1P36222 383 aaPredicted RBP14.28□□□□□ -0.12
CBX3-202ENST00000396386 MVDP53602 400 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 RBBP4Q09028 425 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 RPE65Q16518 533 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 TTC23Q5W5X9 447 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 TRIM40Q6P9F5 258 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 ZNF852Q6ZMS4 543 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 TMEM26Q6ZUK4 368 aa14.28□□□□□ -0.12
CBX3-202ENST00000396386 VTCN1Q7Z7D3 282 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms