RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 COQ5Q5HYK3 327 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 VN1R4Q7Z5H5 301 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 R3HCC1LQ7Z5L2 792 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 MCATQ8IVS2 390 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 TMEM132CQ8N3T6 1108 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 DNAJC22Q8N4W6 341 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 CSNK1A1LQ8N752 337 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 PCYOX1LQ8NBM8 494 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 RBM15BQ8NDT2 890 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 PROKR1Q8TCW9 393 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 PPM1MQ96MI6 270 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 GFM1Q96RP9 751 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 C1orf21Q9H246 121 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 ZNF768Q9H5H4 540 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 DDX31Q9H8H2 851 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 EFCAB1Q9HAE3 211 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 CUL9Q8IWT3 2517 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 GPR179Q6PRD1 2367 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 IGHV5-51A0A0C4DH38 117 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 B2RBV5 119 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 SAP18O00422 153 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 ANGPT2O15123 496 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 NRP2O60462 931 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 EIF2S1P05198 315 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 HPCAL1P37235 193 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 MAPK12P53778 367 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 PLA2G16P53816 162 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 C21orf58P58505 322 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 ILKQ13418 452 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 RCAN2Q14206 197 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 SLC9A5Q14940 896 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 TOR1AIP1Q5JTV8 583 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 PERM1Q5SV97 790 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 GARNL3Q5VVW2 1013 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 ABHD17CQ6PCB6 329 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 BLOC1S3Q6QNY0 202 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 NAXDQ8IW45 347 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 ZCCHC7Q8N3Z6 543 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 NATD1Q8N6N6 113 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 TESCQ96BS2 214 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 C17orf62Q9BQA9 187 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 EBPLQ9BY08 206 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 CADM1Q9BY67 442 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 PDP2Q9P2J9 529 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 BTBD3Q9Y2F9 522 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 NDUFAF1Q9Y375 327 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 SNRNP200O75643 2136 aaKnown RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 CCDC154A6NI56 674 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 GYG2O15488 501 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 KIF1CO43896 1103 aaKnown RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 TBX6O95947 436 aaPredicted RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 NELFEP18615 380 aaKnown RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 HIST1H1TP22492 207 aaPredicted RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 HNRNPH1P31943 449 aaKnown RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 CSF2RBP32927 897 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 CPOXP36551 454 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 EMP3P54852 163 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 NME5P56597 212 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 VSX2P58304 361 aaPredicted RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 UFM1P61960 85 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 CCL7P80098 99 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 MXRA7P84157 204 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 SRSF11Q05519 484 aaKnown RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 LRRC74AQ0VAA2 488 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 HYAL2Q12891 473 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 TRA2AQ13595 282 aaKnown RBP eCLIP13.03□□□□□ -0.323e-6■□□□□ 11.2
VAPB-202ENST00000395802 SPIDRQ14159 915 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 PRR23CQ6ZRP0 262 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 SNX32Q86XE0 403 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 C10orf67Q8IYJ2 551 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 D2HGDHQ8N465 521 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 VPS37AQ8NEZ2 397 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 KLHL6Q8WZ60 621 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 MTERF3Q96E29 417 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 SPDL1Q96EA4 605 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 SLC41A2Q96JW4 573 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 FCRL4Q96PJ5 515 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 TSSK3Q96PN8 268 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 RTKNQ9BST9 563 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 FAIM2Q9BWQ8 316 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 SYNDIG1Q9H7V2 258 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 MYNNQ9NPC7 610 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 ATAD3AQ9NVI7 634 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 IRAK4Q9NWZ3 460 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 DLGAP4Q9Y2H0 992 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 SLC22A7Q9Y694 548 aa13.03□□□□□ -0.32
VAPB-202ENST00000395802 COL5A1P20908 1838 aaPredicted RBP13.03□□□□□ -0.32
VAPB-202ENST00000395802 FRYLO94915 3013 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 A0A1W2PP18 115 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 ANKRD28O15084 1053 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 GSC2O15499 205 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 CFLARO15519 480 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 BSGP35613 385 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 MTTPP55157 894 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 RAE1P78406 368 aaKnown RBP13.02□□□□□ -0.32
VAPB-202ENST00000395802 E2F1Q01094 437 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 ACY1Q03154 408 aa13.02□□□□□ -0.32
VAPB-202ENST00000395802 ART3Q13508 389 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms