RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 VPS4BO75351 444 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 SH3BGRLO75368 114 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 KLHL18O94889 574 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 TIAF1O95411 115 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 NSA2O95478 260 aaKnown RBP12.51□□□□□ -0.41
TIMP1-202ENST00000377017 TBX6O95947 436 aaPredicted RBP12.51□□□□□ -0.41
TIMP1-202ENST00000377017 NTRK1P04629 796 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 CCNYL3P0C7X3 344 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 LINC00032P0C843 101 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 TROVE2P10155 538 aaKnown RBP eCLIP12.51□□□□□ -0.41
TIMP1-202ENST00000377017 IL1RNP18510 177 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 SLC5A2P31639 672 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 SSR2P43308 183 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 GCGRP47871 477 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 MTTPP55157 894 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 RAB8AP61006 207 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 ACSM2AQ08AH3 577 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 ABHD18Q0P651 414 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 MAP7Q14244 749 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 NR6A1Q15406 480 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 DEFB134Q4QY38 66 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 SPDYAQ5MJ70 313 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 PRAMEF17Q5VTA0 474 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 ACSM2BQ68CK6 577 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 ABHD17CQ6PCB6 329 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 SCIMPQ6UWF3 145 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 MTERF4Q7Z6M4 381 aaKnown RBP12.51□□□□□ -0.41
TIMP1-202ENST00000377017 NUDT13Q86X67 352 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 ARHGEF39Q8N4T4 335 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 PMEPA1Q969W9 287 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 PPP3R2Q96LZ3 170 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 C17orf62Q9BQA9 187 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 SIKE1Q9BRV8 207 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 TUBB1Q9H4B7 451 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 KLHL31Q9H511 634 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 CLK4Q9HAZ1 481 aaKnown RBP12.51□□□□□ -0.41
TIMP1-202ENST00000377017 DHCR7Q9UBM7 475 aaKnown RBP12.51□□□□□ -0.41
TIMP1-202ENST00000377017 WASF3Q9UPY6 502 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 TMEM184BQ9Y519 407 aaPredicted RBP12.51□□□□□ -0.41
TIMP1-202ENST00000377017 A0A0A6YYC8 382 aaPredicted RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 CDRT15L2A8MXV6 281 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 NPIPB8E9PQR5 432 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 I3L1I5 382 aaPredicted RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 SAP18O00422 153 aaKnown RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 B3GALT2O43825 422 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 BRINP1O60477 761 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 GALR3O60755 368 aaPredicted RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 MYO1DO94832 1006 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 TGDSO95455 350 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 ETHE1O95571 254 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 SMIM10L1P0DMW3 83 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 PRPH2P23942 346 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 BTN3A2P78410 334 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 DCDP81605 110 aaKnown RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 HMGCS1Q01581 520 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 BTKQ06187 659 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 ATP6AP1LQ52LC2 224 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 XKR7Q5GH72 579 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 ARHGAP40Q5TG30 622 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 OR4C11Q6IEV9 310 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 C6orf15Q6UXA7 325 aaPredicted RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 DSELQ8IZU8 1212 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 METTL4Q8N3J2 472 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 ESX1Q8N693 406 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 TUBGCP3Q96CW5 907 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 MMABQ96EY8 250 aaPredicted RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 SMIM10Q96HG1 83 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF578Q96N58 590 aaPredicted RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 GBP5Q96PP8 586 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 SERINC2Q96SA4 455 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 NPLQ9BXD5 320 aaPredicted RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 MRPL1Q9BYD6 325 aaKnown RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 TRIM55Q9BYV6 548 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 NUF2Q9BZD4 464 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 NSRP1Q9H0G5 558 aaKnown RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 MEAF6Q9HAF1 191 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 LRTM1Q9HBL6 345 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF304Q9HCX3 659 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 ASCL3Q9NQ33 180 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 C1orf109Q9NX04 203 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 FOXJ2Q9P0K8 574 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 ADAM29Q9UKF5 820 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 MRPS2Q9Y399 296 aaKnown RBP12.5□□□□□ -0.41
TIMP1-202ENST00000377017 TMED5Q9Y3A6 229 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 NAALAD2Q9Y3Q0 740 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 USH1CQ9Y6N9 552 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 SPACA6W5XKT8 324 aa12.5□□□□□ -0.41
TIMP1-202ENST00000377017 A0A0G2JN53 185 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 C9J4A7 227 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 MEN1O00255 615 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 PLPP1O14494 284 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 FOXS1O43638 330 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 DLGAP3O95886 979 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 CD63P08962 238 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF28P17035 718 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 SPINK2P20155 84 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 FBLP22087 321 aaKnown RBP12.49□□□□□ -0.41
TIMP1-202ENST00000377017 HIST1H1TP22492 207 aaPredicted RBP12.49□□□□□ -0.41
TIMP1-202ENST00000377017 MAPK1P28482 360 aa12.49□□□□□ -0.41
TIMP1-202ENST00000377017 RORAP35398 523 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms