RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CTSKP43235 329 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 EIF2B2P49770 351 aaKnown RBP24.28■■□□□ 1.48
C9orf40-201ENST00000376854 SCARB2Q14108 478 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 INAVAQ3KP66 663 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 KIAA1958Q8N8K9 716 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 GOT1L1Q8NHS2 421 aaPredicted RBP24.28■■□□□ 1.48
C9orf40-201ENST00000376854 GLYATL1Q969I3 302 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 TOX2Q96NM4 488 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 ZBP1Q9H171 429 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 RAD18Q9NS91 495 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 FKBP14Q9NWM8 211 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 CCL16O15467 120 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 CD40LGP29965 261 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 NUDT6P53370 316 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 WDR5P61964 334 aaKnown RBP24.28■■□□□ 1.48
C9orf40-201ENST00000376854 TMEM115Q12893 351 aaPredicted RBP24.28■■□□□ 1.48
C9orf40-201ENST00000376854 EXOC3L2Q2M3D2 409 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF404Q494X3 552 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 AGAP7PQ5VUJ5 663 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 LGI4Q8N135 537 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 OR52N2Q8NGI0 321 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 NFKBIDQ8NI38 313 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 REPS1Q96D71 796 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 NIPSNAP1Q9BPW8 284 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 TCF25Q9BQ70 676 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 POLE4Q9NR33 117 aa24.28■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF197O14709 1029 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 FGF18O76093 207 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 CSF2RAP15509 400 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 XPAP23025 273 aaPredicted RBP24.27■■□□□ 1.48
C9orf40-201ENST00000376854 PTX3P26022 381 aaPredicted RBP24.27■■□□□ 1.48
C9orf40-201ENST00000376854 PRIM2P49643 509 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 HTRA3P83110 453 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 TSTA3Q13630 321 aaPredicted RBP24.27■■□□□ 1.48
C9orf40-201ENST00000376854 MICAQ29983 383 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 TMEM220Q6QAJ8 160 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 COMMD6Q7Z4G1 85 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 SLC22A16Q86VW1 577 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 MMP27Q9H306 513 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 PRDM8Q9NQV8 689 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 GPR83Q9NYM4 423 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 EIF2DP41214 584 aaKnown RBP24.27■■□□□ 1.48
C9orf40-201ENST00000376854 FCHO2Q0JRZ9 810 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 E2F2Q14209 437 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 POM121L1PQ3SYA9 428 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 TMEM215Q68D42 235 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF605Q86T29 641 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 SYTL1Q8IYJ3 562 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 UTP15Q8TED0 518 aaKnown RBP24.27■■□□□ 1.48
C9orf40-201ENST00000376854 CYB5D2Q8WUJ1 264 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF480Q8WV37 535 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 SORCS1Q8WY21 1168 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 CIDECQ96AQ7 238 aaPredicted RBP24.27■■□□□ 1.48
C9orf40-201ENST00000376854 YME1L1Q96TA2 773 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 ASAH2Q9NR71 780 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF226Q9NYT6 803 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 NFKBIL1Q9UBC1 381 aaPredicted RBP24.27■■□□□ 1.48
C9orf40-201ENST00000376854 ACSL6Q9UKU0 697 aa24.27■■□□□ 1.48
C9orf40-201ENST00000376854 ABHD14A-ACY1A0A1B0GW23 586 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 PRAMEF25A6NGN4 478 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 SAP18O00422 153 aaKnown RBP24.26■■□□□ 1.47
C9orf40-201ENST00000376854 ACRP10323 421 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 TYRP14679 529 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 MAGEA8P43361 318 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 TBPL1P62380 186 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 MC1RQ01726 317 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 RBBP4Q09028 425 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.26■■□□□ 1.47
C9orf40-201ENST00000376854 ZNF675Q8TD23 568 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 VPS35Q96QK1 796 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 METTL15A6NJ78 407 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 ITGA2P17301 1181 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 MAPK9P45984 424 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 PNLIPRP1P54315 467 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 SLBPQ14493 270 aaKnown RBP eCLIP24.26■■□□□ 1.47
C9orf40-201ENST00000376854 CYP27C1Q4G0S4 372 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 USP43Q70EL4 1123 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 ARMCX6Q7L4S7 300 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 SLC46A3Q7Z3Q1 461 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 TECPR1Q7Z6L1 1165 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 DSG4Q86SJ6 1040 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 DEPDC4Q8N2C3 294 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 PPCDCQ96CD2 204 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 TCEAL4Q96EI5 215 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 THSD1Q9NS62 852 aa24.26■■□□□ 1.47
C9orf40-201ENST00000376854 H3BM21 787 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 AQP9O43315 295 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 CTSLP07711 333 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 STSP08842 583 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 ELOAQ14241 798 aaKnown RBP24.25■■□□□ 1.47
C9orf40-201ENST00000376854 LILRA6Q6PI73 481 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 OR9Q2Q8NGE9 314 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 IRF7Q92985 503 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 SH2B3Q9UQQ2 575 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 MAP4K5Q9Y4K4 846 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 LTBP2Q14767 1821 aa24.25■■□□□ 1.47
C9orf40-201ENST00000376854 J3KTA2 159 aa24.24■■□□□ 1.47
C9orf40-201ENST00000376854 CNOT3O75175 753 aaKnown RBP24.24■■□□□ 1.47
C9orf40-201ENST00000376854 C1orf105O95561 183 aa24.24■■□□□ 1.47
C9orf40-201ENST00000376854 TGFB1P01137 390 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms