RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PSIP1O75475 530 aaKnown RBP12.69□□□□□ -0.38
ACTN1-202ENST00000376839 ANXA8P13928 327 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 ZNF8P17098 575 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-202ENST00000376839 IMPA1P29218 277 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 RCVRNP35243 200 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 HNF4AP41235 474 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 TM4SF4P48230 202 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 CTSCP53634 463 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 SCARB2Q14108 478 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 IRF3Q14653 427 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 ASTLQ6HA08 431 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-202ENST00000376839 METTL3Q86U44 580 aaKnown RBP12.69□□□□□ -0.38
ACTN1-202ENST00000376839 AKAP14Q86UN6 197 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 CYP4Z2PQ8N1L4 340 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 METTL4Q8N3J2 472 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 B3GNT7Q8NFL0 401 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 KBTBD8Q8NFY9 601 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 OR5AK3PQ8NH89 298 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 SLC35A5Q9BS91 424 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 BRF2Q9HAW0 419 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 IMPAD1Q9NX62 359 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 HS3ST2Q9Y278 367 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 A3GALT2U3KPV4 340 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 FADS2P1A8MWK0 482 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 SAP18O00422 153 aaKnown RBP12.69□□□□□ -0.38
ACTN1-202ENST00000376839 RNASET2O00584 256 aaKnown RBP12.69□□□□□ -0.38
ACTN1-202ENST00000376839 SSX4O60224 188 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 S100A5P33763 92 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 ETV3P41162 512 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 PRKCDQ05655 676 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 KCNC3Q14003 757 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 LRIT3Q3SXY7 679 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 GCNT6Q5T4J0 391 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-202ENST00000376839 HTR3DQ70Z44 454 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 SLC7A5P1Q8MH63 180 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 NEIL2Q969S2 332 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 CORO1BQ9BR76 489 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 FAM83DQ9H4H8 585 aa12.69□□□□□ -0.38
ACTN1-202ENST00000376839 MRPL17Q9NRX2 175 aaKnown RBP12.69□□□□□ -0.38
ACTN1-202ENST00000376839 PRAMEF33A0A0G2JMD5 474 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 KPNA5O15131 536 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 PRAMEF10O60809 474 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 HSD3B1P14060 373 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 HSD3B2P26439 372 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 UGT2B15P54855 530 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 CCL23P55773 120 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 GANABQ14697 944 aaKnown RBP12.68□□□□□ -0.38
ACTN1-202ENST00000376839 MPEG1Q2M385 716 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 FBXO43Q4G163 708 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 MPP7Q5T2T1 576 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 SPATC1Q76KD6 591 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 TMPRSS11BQ86T26 416 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 CPXM2Q8N436 756 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 Q8N9G6 341 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-202ENST00000376839 DENND6BQ8NEG7 585 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 FAM129BQ96TA1 746 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 PKP4Q99569 1192 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 RHCGQ9UBD6 479 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 ITGB1BP2Q9UKP3 347 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 SH2B3Q9UQQ2 575 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 HELZP42694 1942 aaKnown RBP12.68□□□□□ -0.38
ACTN1-202ENST00000376839 PCM1Q15154 2024 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 FAM227AF5H4B4 570 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 HAT1O14929 419 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 ZNF45Q02386 682 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 SYTL3Q4VX76 610 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 SPIN4Q56A73 249 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 SPOUT1Q5T280 376 aaKnown RBP12.68□□□□□ -0.38
ACTN1-202ENST00000376839 ZDHHC20Q5W0Z9 365 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 GDPD3Q7L5L3 318 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 CLIP4Q8N3C7 705 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 TSEN34Q9BSV6 310 aaKnown RBP12.68□□□□□ -0.38
ACTN1-202ENST00000376839 CPEB1Q9BZB8 566 aaKnown RBP12.68□□□□□ -0.38
ACTN1-202ENST00000376839 ACER3Q9NUN7 267 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 MAP4K5Q9Y4K4 846 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 PCDHGB6Q9Y5F9 930 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 ALPK3Q96L96 1907 aa12.68□□□□□ -0.38
ACTN1-202ENST00000376839 NPC1O15118 1278 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 KMOO15229 486 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 KIAA0513O60268 411 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 POP4O95707 220 aaKnown RBP12.67□□□□□ -0.38
ACTN1-202ENST00000376839 PTTG1O95997 202 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 CTSAP10619 480 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 PDHA2P29803 388 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 NR4A2P43354 598 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 RAB33AQ14088 237 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 PTGES3Q15185 160 aaKnown RBP12.67□□□□□ -0.38
ACTN1-202ENST00000376839 SF3B4Q15427 424 aaKnown RBP eCLIP12.67□□□□□ -0.381e-25■■■■■ 49.5
ACTN1-202ENST00000376839 MED22Q15528 200 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 TSTQ16762 297 aaKnown RBP12.67□□□□□ -0.38
ACTN1-202ENST00000376839 PRSS53Q2L4Q9 553 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 IER5LQ5T953 404 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 ARMCX6Q7L4S7 300 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 TMCO2Q7Z6W1 182 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-202ENST00000376839 DEFB128Q7Z7B8 93 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 RNF130Q86XS8 419 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 CELF2-AS1Q8N7Q2 184 aa12.67□□□□□ -0.38
ACTN1-202ENST00000376839 PSD4Q8NDX1 1056 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms