RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	FAM9C	Q8IZT9	166 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	LSMEM2	Q8N112	164 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	FBXL6	Q8N531	539 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	MINDY1	Q8N5J2	469 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	PROX1	Q92786	737 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	SLC35A5	Q9BS91	424 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	RHCG	Q9UBD6	479 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	PPIE	Q9UNP9	301 aa	Known RBP	12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	SLC9A8	Q9Y2E8	581 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	GREB1	Q4ZG55	1949 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568	PIEZO2	Q9H5I5	2752 aa		12.96	□□□□□ -0.34
DDR1-225	ENST00000376568		H7C0S8	307 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	CLIC1	O00299	241 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	ANGPT1	Q15389	498 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	TMEM107	Q6UX40	140 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	PARP8	Q8N3A8	854 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	FAM13C	Q8NE31	585 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	OR5K2	Q8NHB8	316 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	SH3GL1	Q99961	368 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	SPNS1	Q9H2V7	528 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	TRPV4	Q9HBA0	871 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	SEC14L3	Q9UDX4	400 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	FAM221B	A6H8Z2	402 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	ST6GAL1	P15907	406 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	SLC26A3	P40879	764 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	OR1E2	P47887	323 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	NSDHL	Q15738	373 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	METRNL	Q641Q3	311 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	FIGNL1	Q6PIW4	674 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	R3HCC1L	Q7Z5L2	792 aa	Known RBP	12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	GALNT5	Q7Z7M9	940 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	BTBD9	Q96Q07	612 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	ELF4	Q99607	663 aa	Predicted RBP	12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	TMEM79	Q9BSE2	394 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	WARS2	Q9UGM6	360 aa	Known RBP	12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	TMCO1	Q9UM00	188 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	SH2B3	Q9UQQ2	575 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	MYO16	Q9Y6X6	1858 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	IGHV3-20	A0A0C4DH32	117 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	C4orf47	A7E2U8	309 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568		H0YGG7	62 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	GAPDHS	O14556	408 aa	Predicted RBP	12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	CASC3	O15234	703 aa	Known RBP	12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	UGT2B7	P16662	529 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	IDH2	P48735	452 aa	Known RBP	12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	ARF3	P61204	181 aa	Predicted RBP	12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	DHRS13	Q6UX07	377 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	TRPV3	Q8NET8	790 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	COL21A1	Q96P44	957 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	GPR78	Q96P69	363 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	DCBLD2	Q96PD2	775 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	ZFYVE21	Q9BQ24	234 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	LRRC61	Q9BV99	259 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	IFT80	Q9P2H3	777 aa	Predicted RBP	12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	ERVK-11	Q9UQG0	969 aa		12.95	□□□□□ -0.34
DDR1-225	ENST00000376568	EYS	Q5T1H1	3165 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	PRKAR1A	P10644	381 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	NPPB	P16860	134 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	TNFRSF1B	P20333	461 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	PRDX1	Q06830	199 aa	Known RBP	12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	ADAMTSL4	Q6UY14	1074 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	SPATA19	Q7Z5L4	167 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	RNF130	Q86XS8	419 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	MCAT	Q8IVS2	390 aa	Known RBP	12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	NLGN4X	Q8N0W4	816 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	ZFP28	Q8NHY6	868 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	INPP5K	Q9BT40	448 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	DENND2D	Q9H6A0	471 aa	Predicted RBP	12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	ZBTB20	Q9HC78	741 aa	Predicted RBP	12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	TMEM74B	Q9NUR3	256 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	RPS6KB2	Q9UBS0	482 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	DMTF1	Q9Y222	760 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	IGF2R	P11717	2491 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	LOC105369274	A0A096LPK9	316 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	LOC102723532	A0A0G2JNH3	316 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	OR5K4	A6NMS3	321 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	OR7A17	O14581	309 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	BCHE	P06276	602 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	CSNK2A2	P19784	350 aa	Predicted RBP	12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	CBL	P22681	906 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	MASP1	P48740	699 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	HK2	P52789	917 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	SIGLEC14	Q08ET2	396 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	TUBB3	Q13509	450 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	PLXDC1	Q8IUK5	500 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	OR4N4	Q8N0Y3	316 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	FBXL8	Q96CD0	374 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	LYSMD1	Q96S90	227 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	NUDT22	Q9BRQ3	303 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	EPHX3	Q9H6B9	360 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	SOX17	Q9H6I2	414 aa	Predicted RBP	12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	C3orf14	Q9HBI5	128 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	POPDC3	Q9HBV1	291 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	GPRC5B	Q9NZH0	403 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	LCMT2	O60294	686 aa	Known RBP	12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	TGDS	O95455	350 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	FUCA1	P04066	466 aa		12.94	□□□□□ -0.34
DDR1-225	ENST00000376568	ALOX12	P18054	663 aa		12.94	□□□□□ -0.34

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