RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CD9P21926 228 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 GLYATL2Q8WU03 294 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 DCUN1D4Q92564 292 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 GPN2Q9H9Y4 310 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-201ENST00000371817 RPS10-NUDT3A0A1W2PQS6 291 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 CBY3A6NI87 242 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 KLRC2P26717 231 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 RPS10P46783 165 aaKnown RBP14.8□□□□□ -0.04
COL5A1-201ENST00000371817 LASP1Q14847 261 aaKnown RBP14.8□□□□□ -0.04
COL5A1-201ENST00000371817 GRIN2CQ14957 1233 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 HMGN3Q15651 99 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 SLC2A7Q6PXP3 512 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 HSH2DQ96JZ2 352 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 GTF2IRD1Q9UHL9 959 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 CYP2B6P20813 491 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 OPRL1P41146 370 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 TMCO2Q7Z6W1 182 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 PIGZQ86VD9 579 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 PURBQ96QR8 312 aaKnown RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 PCDHGA5Q9Y5G8 931 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ERCC1P07992 297 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 IRF9Q00978 393 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 CYP2W1Q8TAV3 490 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 SNX27Q96L92 541 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ICMTO60725 284 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ECI2O75521 394 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 PTH2RP49190 550 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 GTF2BQ00403 316 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 SULT2A1Q06520 285 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 OR5H6Q8NGV6 325 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ORAI3Q9BRQ5 295 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 STRA6Q9BX79 667 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ZFR2Q9UPR6 939 aaKnown RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 RAB6AP20340 208 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 DBPQ10586 325 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ANKRD22Q5VYY1 191 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 REPS2Q8NFH8 660 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 MEPEQ9NQ76 525 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 TRBC2A0A5B9 178 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 PCDH7O60245 1069 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ADRB2P07550 413 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 UBBP0CG47 229 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 UBCP0CG48 685 aaKnown RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 FRKP42685 505 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 DUOXA1Q1HG43 343 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 CEACAM19Q7Z692 300 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 C2orf73Q8N5S3 287 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 LRRC57Q8N9N7 239 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 PAQR8Q8TEZ7 354 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 TCEAL2Q9H3H9 227 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 CYTIPO60759 359 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 BEST1O76090 585 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 CXCR1P25024 350 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 CMPK1P30085 196 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ADH7P40394 386 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 PUS10Q3MIT2 529 aaKnown RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 OR6Q1Q8NGQ2 317 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 OVCA2Q8WZ82 227 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 FBRSQ9HAH7 460 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 STXBP5LQ9Y2K9 1186 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 NUBP2Q9Y5Y2 271 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 PREX2Q70Z35 1606 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 A0A1W2PQL4 384 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 HYKKA2RU49 373 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 KLF11O14901 512 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 KCNJ13O60928 360 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 SNRNP200O75643 2136 aaKnown RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 RAD51DO75771 328 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 CREMQ03060 361 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 CYP1B1Q16678 543 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 IDO2Q6ZQW0 420 aa14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ZNF701Q9NV72 531 aaPredicted RBP14.79□□□□□ -0.04
COL5A1-201ENST00000371817 ATP5A1P25705 553 aaKnown RBP14.78□□□□□ -0.04
COL5A1-201ENST00000371817 PBX1P40424 430 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 GALNT1Q10472 559 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-201ENST00000371817 STK11Q15831 433 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 CEACAM20Q6UY09 585 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 HS3ST5Q8IZT8 346 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 OTOP3Q7RTS5 596 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 OR52E4Q8NGH9 312 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 AZIN2Q96A70 460 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 OR52B2Q96RD2 323 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM106CQ9BVX2 250 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ANKMY1Q9P2S6 941 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 A0A1W2PRB8 838 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ANKRD63C9JTQ0 380 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 MFSD11O43934 449 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 C1QTNF8P60827 252 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 NIPAL3Q6P499 406 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 MON1BQ7L1V2 547 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM150BA6NC51 233 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 TISP43B9A030 160 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 J3QR89 54 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 RFTN1Q14699 578 aaPredicted RBP14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ATG9BQ674R7 924 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 ZER1Q7Z7L7 766 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 OR51I1Q9H343 314 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 JCADQ9P266 1359 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 RFXAPO00287 272 aa14.78□□□□□ -0.04
COL5A1-201ENST00000371817 PSEN2P49810 448 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms