RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 NAA20P61599 178 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 ASPHQ12797 758 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 ZRSR2Q15696 482 aaKnown RBP14.06□□□□□ -0.16
COL9A1-204ENST00000370496 GGTA1PQ4G0N0 100 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 CRTC2Q53ET0 693 aaPredicted RBP14.06□□□□□ -0.16
COL9A1-204ENST00000370496 MFSD4BQ5TF39 518 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 LIPMQ5VYY2 423 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 GPRIN3Q6ZVF9 776 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 AFAP1L2Q8N4X5 818 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 OR2L5Q8NG80 312 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 HUS1BQ8NHY5 278 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 STT3BQ8TCJ2 826 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 ZNF473Q8WTR7 871 aaKnown RBP14.06□□□□□ -0.16
COL9A1-204ENST00000370496 SREK1Q8WXA9 508 aaKnown RBP14.06□□□□□ -0.16
COL9A1-204ENST00000370496 MS4A6EQ96DS6 147 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 CATSPER2Q96P56 530 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 ZNF382Q96SR6 550 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 MTERF1Q99551 399 aaKnown RBP14.06□□□□□ -0.16
COL9A1-204ENST00000370496 SPSB2Q99619 263 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 CENPKQ9BS16 269 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 CRB3Q9BUF7 120 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 MS4A8Q9BY19 250 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 RBCK1Q9BYM8 510 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 ELOVL6Q9H5J4 265 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 DMRT3Q9NQL9 472 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 OXSMQ9NWU1 459 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 TRPS1Q9UHF7 1281 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 LHX6Q9UPM6 363 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 MAN2B2Q9Y2E5 1009 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 SEC16AO15027 2179 aa14.06□□□□□ -0.16
COL9A1-204ENST00000370496 KMT2BQ9UMN6 2715 aaPredicted RBP14.05□□□□□ -0.16
COL9A1-204ENST00000370496 A0A0G2JN53 185 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 C4orf51C9J302 202 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 SH3BGRLO75368 114 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 ZGLP1P0C6A0 271 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 PIK3CBP42338 1070 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 XCR1P46094 333 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 RAP1GDS1P52306 607 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 PLA2G16P53816 162 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 DNAJB13P59910 316 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 OLR1P78380 273 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 IFT88Q13099 833 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 VWA2Q5GFL6 755 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 FRG2Q64ET8 278 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 LETMD1Q6P1Q0 360 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 FRMD7Q6ZUT3 714 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 CHSY3Q70JA7 882 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 C10orf107Q8IVU9 208 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 ZC3H7AQ8IWR0 971 aaKnown RBP14.05□□□□□ -0.16
COL9A1-204ENST00000370496 CMTM7Q96FZ5 175 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 KCNC2Q96PR1 638 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 FRG2BQ96QU4 278 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 GSTO2Q9H4Y5 243 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 SSU72Q9NP77 194 aaKnown RBP14.05□□□□□ -0.16
COL9A1-204ENST00000370496 POLHQ9Y253 713 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 ACTL7BQ9Y614 415 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 CCDC88CQ9P219 2028 aa14.05□□□□□ -0.16
COL9A1-204ENST00000370496 IGLV3-12A0A075B6K2 115 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 VSTM2BA6NLU5 285 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 PPP6CO00743 305 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 TYROBPO43914 113 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 OR4F21O95013 312 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 RECKO95980 971 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 TGFB1P01137 390 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 UMODP07911 640 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 H2AFXP16104 143 aaPredicted RBP14.04□□□□□ -0.16
COL9A1-204ENST00000370496 HMOX2P30519 316 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 SSR2P43308 183 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 NAGLUP54802 743 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 RPS13P62277 151 aaKnown RBP14.04□□□□□ -0.16
COL9A1-204ENST00000370496 BTN3A2P78410 334 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 KLC1Q07866 573 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 DEFB109BQ30KR1 87 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 ADPRMQ3LIE5 342 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 MINDY4Q4G0A6 757 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 TMEM35AQ53FP2 167 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 C10orf62Q5T681 223 aaPredicted RBP14.04□□□□□ -0.16
COL9A1-204ENST00000370496 KHDRBS2Q5VWX1 349 aaKnown RBP14.04□□□□□ -0.16
COL9A1-204ENST00000370496 MRGPREQ86SM8 312 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 EXOC3L1Q86VI1 746 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 RNF175Q8N4F7 328 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 CDYL2Q8N8U2 506 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 SRFBP1Q8NEF9 429 aaKnown RBP14.04□□□□□ -0.16
COL9A1-204ENST00000370496 OR5T3Q8NGG3 340 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 OR51Q1Q8NH59 317 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 F2RL3Q96RI0 385 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 MECRQ9BV79 373 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 AICDAQ9GZX7 198 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 SEMA3GQ9NS98 782 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 SNX6Q9UNH7 406 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 TSC22D4Q9Y3Q8 395 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 ITPR1Q14643 2758 aa14.04□□□□□ -0.16
COL9A1-204ENST00000370496 A0A1B0GTL3 188 aa14.03□□□□□ -0.16
COL9A1-204ENST00000370496 MAGEB17A8MXT2 336 aa14.03□□□□□ -0.16
COL9A1-204ENST00000370496 PSMD12O00232 456 aaPredicted RBP14.03□□□□□ -0.16
COL9A1-204ENST00000370496 SAP18O00422 153 aaKnown RBP14.03□□□□□ -0.16
COL9A1-204ENST00000370496 PEX12O00623 359 aa14.03□□□□□ -0.16
COL9A1-204ENST00000370496 TM9SF1O15321 606 aa14.03□□□□□ -0.16
COL9A1-204ENST00000370496 B3GALT2O43825 422 aa14.03□□□□□ -0.16
COL9A1-204ENST00000370496 CRCPO75575 148 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms