RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PCDHB14Q9Y5E9 798 aa16.03■□□□□ 0.16
PHGDH-202ENST00000369409 A0A0J9YY10 115 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 ERI3O43414 337 aaKnown RBP16.02■□□□□ 0.16
PHGDH-202ENST00000369409 TNFSF14O43557 240 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 SCN2BO60939 215 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 ANP32DO95626 131 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 HOXB9P17482 250 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-202ENST00000369409 AP2B1P63010 937 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 MRPS22P82650 360 aaKnown RBP16.02■□□□□ 0.16
PHGDH-202ENST00000369409 BNIP2Q12982 314 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 BIRC2Q13490 618 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 PDE7AQ13946 482 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 ADPRMQ3LIE5 342 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 SPATS1Q496A3 300 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 TMEM35AQ53FP2 167 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 ARMC6Q6NXE6 501 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 IKBIPQ70UQ0 350 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 ZNF438Q7Z4V0 828 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 VN1R4Q7Z5H5 301 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 C1orf210Q8IVY1 113 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 MMP21Q8N119 569 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 DNAJB8Q8NHS0 232 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 MS4A6EQ96DS6 147 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 AURKBQ96GD4 344 aaPredicted RBP16.02■□□□□ 0.16
PHGDH-202ENST00000369409 QRFPRQ96P65 431 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 TEFMQ96QE5 360 aaKnown RBP16.02■□□□□ 0.16
PHGDH-202ENST00000369409 PANX1Q96RD7 426 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 IKZF5Q9H5V7 419 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 PIF1Q9H611 641 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 S100A14Q9HCY8 104 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 ANKMY1Q9P2S6 941 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 EGFL7Q9UHF1 273 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 USP22Q9UPT9 525 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 SNX11Q9Y5W9 270 aa16.02■□□□□ 0.16
PHGDH-202ENST00000369409 NCOR1O75376 2440 aa16.02■□□□□ 0.15
PHGDH-202ENST00000369409 A0A1B0GTW7 788 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 TMEM221A6NGB7 291 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 M0R296 226 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 TMPRSS11DO60235 418 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 CTSVO60911 334 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 PTPN6P29350 595 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 SOX11P35716 441 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 RPL3P39023 403 aaKnown RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 TRAP1Q12931 704 aaKnown RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 DUOXA1Q1HG43 343 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 RUNDC3AQ59EK9 446 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 OR4C11Q6IEV9 310 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 AAGABQ6PD74 315 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 CYP2R1Q6VVX0 501 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 ZNF793Q6ZN11 406 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 R3HCC1LQ7Z5L2 792 aaKnown RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 SPATA24Q86W54 205 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 AMER3Q8N944 861 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 PPCDCQ96CD2 204 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 COQ8BQ96D53 544 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 GBP5Q96PP8 586 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 MIEF1Q9NQG6 463 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 TMEM74BQ9NUR3 256 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 STX18Q9P2W9 335 aaKnown RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 ADAM29Q9UKF5 820 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 SCN3AQ9NY46 2000 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 A0A0J9YVX5 310 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 PRAMEF10O60809 474 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 UBXN7O94888 489 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 STAMBPO95630 424 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 CPSF4O95639 269 aaKnown RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 ATP6V1B2P21281 511 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 CTSKP43235 329 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 KLC1Q07866 573 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 ASPGQ86U10 573 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 C17orf82Q86X59 251 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 DHFR2Q86XF0 187 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 SDR16C5Q8N3Y7 309 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 TMEM105Q8N8V8 129 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 OR2L5Q8NG80 312 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 RSRC1Q96IZ7 334 aaKnown RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 CPPED1Q9BRF8 314 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 THUMPD3Q9BV44 507 aaKnown RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 BHLHE41Q9C0J9 482 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 DDX31Q9H8H2 851 aaKnown RBP16.01■□□□□ 0.15
PHGDH-202ENST00000369409 ATAD3AQ9NVI7 634 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 POMT2Q9UKY4 750 aa16.01■□□□□ 0.15
PHGDH-202ENST00000369409 BDP1A6H8Y1 2624 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 ADAMTS9Q9P2N4 1935 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 A0A0A6YYD5 115 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 LILRA5A6NI73 299 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 NVLO15381 856 aaKnown RBP16■□□□□ 0.15
PHGDH-202ENST00000369409 FKBP9O95302 570 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 ANPEPP15144 967 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 GNSP15586 552 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 TRPC1P48995 793 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 BNC1Q01954 994 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 PLK5Q496M5 336 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 C14orf28Q4W4Y0 310 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 ANXA8L1Q5VT79 327 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 FBXO42Q6P3S6 717 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 TRIM40Q6P9F5 258 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 BAHD1Q8TBE0 780 aaPredicted RBP16■□□□□ 0.15
PHGDH-202ENST00000369409 TM4SF18Q96CE8 201 aa16■□□□□ 0.15
PHGDH-202ENST00000369409 MTERF3Q96E29 417 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms