RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SKA3Q8IX90 412 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 OR2T11Q8NH01 316 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 TSPEARQ8WU66 669 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 CNOT9Q92600 299 aaKnown RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 TMEM175Q9BSA9 504 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 TUBG2Q9NRH3 451 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 ZNF639Q9UID6 485 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 ZNF197O14709 1029 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 PPP1R2P9O14990 202 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 RHCEP18577 417 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 NFYAP23511 347 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 GDI1P31150 447 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 DSG3P32926 999 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 GPR50Q13585 617 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 PGM5Q15124 567 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 PARP15Q460N3 678 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 C14orf28Q4W4Y0 310 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 PRAMEF17Q5VTA0 474 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 C9orf131Q5VYM1 1079 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 TIPARPQ7Z3E1 657 aaKnown RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 COMTD1Q86VU5 262 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 NRROSQ86YC3 692 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 RASGRP3Q8IV61 690 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 OR1J4Q8NGS1 313 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 FGFBP2Q9BYJ0 223 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 ANKRD19PQ9H560 264 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 KRCC1Q9NPI7 259 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 LOC100509620A0A075B734 347 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 AIPO00170 330 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 MEIS2O14770 477 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 PIP5K1BO14986 540 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 CDC123O75794 336 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 TRUB2O95900 331 aaKnown RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 IFNGP01579 166 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 IFNGR2P38484 337 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 MAGEB1P43366 347 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 CLCN4P51793 760 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 GP2P55259 537 aaKnown RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 SP2Q02086 613 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 NRG1Q02297 640 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 ALKBH1Q13686 389 aaKnown RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 TBCEQ15813 527 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 SEZ6Q53EL9 994 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 SLC22A10Q63ZE4 541 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 TMEM200AQ86VY9 491 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 SCN4BQ8IWT1 228 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 THEM5Q8N1Q8 247 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 BOLLQ8N9W6 283 aaKnown RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 OR5T1Q8NG75 326 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 STAG3L4Q8TBR4 150 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 HAS1Q92839 578 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 TMEM74Q96NL1 305 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 OR4K3Q96R72 315 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 LMAN2LQ9H0V9 348 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 PIGMQ9H3S5 423 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 RNF215Q9Y6U7 377 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 MYH13Q9UKX3 1938 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 RPS10-NUDT3A0A1W2PQS6 291 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 NME4O00746 187 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 OR10H3O60404 316 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 PRH1P02810 166 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 PTAFRP25105 342 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 CHI3L1P36222 383 aaPredicted RBP10.07□□□□□ -0.8
PRDM1-201ENST00000369089 RPS10P46783 165 aaKnown RBP10.07□□□□□ -0.8
PRDM1-201ENST00000369089 GPR143P51810 404 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 SMIM11AP58511 58 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 BTG1P62324 171 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 ADARB1P78563 741 aaKnown RBP10.07□□□□□ -0.8
PRDM1-201ENST00000369089 CRYZQ08257 329 aaKnown RBP10.07□□□□□ -0.8
PRDM1-201ENST00000369089 C6orf132Q5T0Z8 1188 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 IRAK1BP1Q5VVH5 260 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 CD276Q5ZPR3 534 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 H3F3CQ6NXT2 135 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 KANSL1Q7Z3B3 1105 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 PABPC5Q96DU9 382 aaKnown RBP10.07□□□□□ -0.8
PRDM1-201ENST00000369089 KREMEN1Q96MU8 473 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 LINC00052Q96N35 136 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 METTL17Q9H7H0 456 aaPredicted RBP10.07□□□□□ -0.8
PRDM1-201ENST00000369089 AKTIPQ9H8T0 292 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 TPT1P8Q9HAU6 139 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 MRTO4Q9UKD2 239 aaKnown RBP10.07□□□□□ -0.8
PRDM1-201ENST00000369089 LRIT2A6NDA9 550 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 TGOLN2O43493 480 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 CALCAP01258 141 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 COL6A1P12109 1028 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 YWHAQP27348 245 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 TCTE1Q5JU00 501 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 ZNF691Q5VV52 312 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 IGDCC3Q8IVU1 814 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 CPNE4Q96A23 557 aaPredicted RBP10.07□□□□□ -0.8
PRDM1-201ENST00000369089 MEGF10Q96KG7 1140 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 P2RY13Q9BPV8 354 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 RAD18Q9NS91 495 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 OR6C2Q9NZP2 312 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 ST3GAL5Q9UNP4 418 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 PCDHGB7Q9Y5F8 929 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 CSNK1G3Q9Y6M4 447 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 OR5K4A6NMS3 321 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 WASH4PA8MWX3 477 aa10.07□□□□□ -0.8
PRDM1-201ENST00000369089 TGFB1I1O43294 461 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms