RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 PURGQ9UJV8 347 aaKnown RBP4.34□□□□□ -1.71
PTPN22-201ENST00000359785 TRAV1-2A0A0B4J238 106 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 GLYATL1P3A0A0U1RQE8 302 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 SLC12A8A0AV02 714 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 C2orf81A6NN90 581 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 LACTBL1A8MY62 500 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 KLF4O43474 513 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 SGTAO43765 313 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 HS6ST1O60243 411 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 TLR5O60602 858 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 VNN2O95498 520 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 MT-ND1P03886 318 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 FABP3P05413 133 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 NFICP08651 508 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 ICAM2P13598 275 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 NPR3P17342 541 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 PFKLP17858 780 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 POU3F3P20264 500 aaPredicted RBP4.34□□□□□ -1.72
PTPN22-201ENST00000359785 YWHAQP27348 245 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 RORAP35398 523 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 STAT5BP51692 787 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 CCNA1P78396 465 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 SLC7A9P82251 487 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 MRPS10P82664 201 aaKnown RBP4.34□□□□□ -1.72
PTPN22-201ENST00000359785 CDK5Q00535 292 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 HSF2Q03933 536 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 SRSF11Q05519 484 aaKnown RBP4.34□□□□□ -1.72
PTPN22-201ENST00000359785 TMEM132BQ14DG7 1078 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 VMACQ2NL98 169 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 C6orf183Q5T699 404 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 FAM69AQ5T7M9 428 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 LCN1P1Q5VSP4 162 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 C9orf57Q5W0N0 161 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 JADE1Q6IE81 842 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 SLC27A4Q6P1M0 643 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 FAM198BQ6UWH4 519 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 DPY19L3Q6ZPD9 716 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 DCXRQ7Z4W1 244 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 SAPCD2Q86UD0 394 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 PGBD5Q8N414 524 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 EFHBQ8N7U6 833 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 TTC29Q8NA56 475 aaPredicted RBP4.34□□□□□ -1.72
PTPN22-201ENST00000359785 LRRC20Q8TCA0 184 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 BRSK1Q8TDC3 778 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 NETO1Q8TDF5 533 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 SGCDQ92629 289 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 SCPEP1Q9HB40 452 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 ZNF304Q9HCX3 659 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 TMEM100Q9NV29 134 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 SLC17A6Q9P2U8 582 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 EXTL2Q9UBQ6 330 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 ADAM30Q9UKF2 790 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 POMT2Q9UKY4 750 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 MKL2Q9ULH7 1088 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 Q9Y3F1 56 aa4.34□□□□□ -1.72
PTPN22-201ENST00000359785 ANKDD1BA6NHY2 528 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 DNASE2O00115 360 aaPredicted RBP4.33□□□□□ -1.72
PTPN22-201ENST00000359785 CLIC1O00299 241 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 WNT10BO00744 389 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 TO15178 435 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 ORC5O43913 435 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 ADAMTS4O75173 837 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 GCM2O75603 506 aaPredicted RBP4.33□□□□□ -1.72
PTPN22-201ENST00000359785 DDNO94850 711 aaPredicted RBP4.33□□□□□ -1.72
PTPN22-201ENST00000359785 KAT7O95251 611 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 SOD1P00441 154 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 RPL10P27635 214 aaKnown RBP4.33□□□□□ -1.72
PTPN22-201ENST00000359785 YBEYP58557 167 aaPredicted RBP4.33□□□□□ -1.72
PTPN22-201ENST00000359785 IL1RL1Q01638 556 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 RAB40BQ12829 278 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 SLAMF1Q13291 335 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 SERINC3Q13530 473 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 KRT33BQ14525 404 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 TAF1AQ15573 450 aaPredicted RBP4.33□□□□□ -1.72
PTPN22-201ENST00000359785 RAB6CQ53S08 254 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 HECTD3Q5T447 861 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 WSCD1Q658N2 575 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 SBSNQ6UWP8 590 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 ENPP6Q6UWR7 440 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 PAGE2Q7Z2X7 111 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 OSTM1Q86WC4 334 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 LRRC28Q86X40 367 aaPredicted RBP4.33□□□□□ -1.72
PTPN22-201ENST00000359785 C1QL4Q86Z23 238 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 CLEC10AQ8IUN9 316 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 PLD3Q8IV08 490 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 FAM217AQ8IXS0 508 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 CLIP4Q8N3C7 705 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 SLC43A3Q8NBI5 491 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 CEP76Q8TAP6 659 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 STOML3Q8TAV4 291 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 SLC7A13Q8TCU3 470 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 CSGALNACT1Q8TDX6 532 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 RBPMSQ93062 196 aaKnown RBP4.33□□□□□ -1.72
PTPN22-201ENST00000359785 SAMD8Q96LT4 415 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 SLC6A18Q96N87 628 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 PPP1R16BQ96T49 567 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 ATF6BQ99941 703 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 YIPF4Q9BSR8 244 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 ZNF426Q9BUY5 554 aa4.33□□□□□ -1.72
PTPN22-201ENST00000359785 ACAT2Q9BWD1 397 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms