RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 MINDY2Q8NBR6 621 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 UTP15Q8TED0 518 aaKnown RBP8.25□□□□□ -1.09
RFX3-202ENST00000358730 MYDGFQ969H8 173 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 PPCDCQ96CD2 204 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 DACH2Q96NX9 599 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 VPS35Q96QK1 796 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 FAM83CQ9BQN1 747 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 WRAP53Q9BUR4 548 aaKnown RBP8.25□□□□□ -1.09
RFX3-202ENST00000358730 TMEM121BQ9BXQ6 578 aaPredicted RBP8.25□□□□□ -1.09
RFX3-202ENST00000358730 LINC00597Q9H2U6 94 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 DSN1Q9H410 356 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 DMRT3Q9NQL9 472 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 PRDM8Q9NQV8 689 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 SPHK2Q9NRA0 654 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 PCDH10Q9P2E7 1040 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 IL36AQ9UHA7 158 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 PSORS1C1Q9UIG5 152 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 OSGIN1Q9UJX0 560 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 PAIP2BQ9ULR5 123 aaKnown RBP8.25□□□□□ -1.09
RFX3-202ENST00000358730 POFUT2Q9Y2G5 429 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 DYRK1BQ9Y463 629 aa8.25□□□□□ -1.09
RFX3-202ENST00000358730 CCDC88CQ9P219 2028 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 TSPAN11A1L157 253 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 PIPSLA2A3N6 862 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 ZNF197O14709 1029 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 TNFRSF21O75509 655 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 C1orf105O95561 183 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 TGFB1P01137 390 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 TPP2P29144 1249 aaPredicted RBP8.24□□□□□ -1.09
RFX3-202ENST00000358730 CHI3L1P36222 383 aaPredicted RBP8.24□□□□□ -1.09
RFX3-202ENST00000358730 MMP12P39900 470 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 SLC19A1P41440 591 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 MAPK9P45984 424 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 PCDH1Q08174 1060 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 DMC1Q14565 340 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 GRIN2CQ14957 1233 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 TEAD2Q15562 447 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 ZNF805Q5CZA5 627 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 PLEKHG7Q6ZR37 379 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 DPPA4Q7L190 304 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 TECPR1Q7Z6L1 1165 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 KLHL23Q8NBE8 558 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 OR9Q2Q8NGE9 314 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 OR52N2Q8NGI0 321 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 NIPSNAP1Q9BPW8 284 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 OR51B5Q9H339 312 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 TRIM39Q9HCM9 518 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 POLE4Q9NR33 117 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 GPR83Q9NYM4 423 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 SPASTQ9UBP0 616 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 ATP6V1HQ9UI12 483 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 MAP4K5Q9Y4K4 846 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 J3KTA2 159 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 M0R129 80 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 CDK1P06493 297 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 ALOX5P09917 674 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 FURINP09958 794 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 GADD45AP24522 165 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 PTX3P26022 381 aaPredicted RBP8.24□□□□□ -1.09
RFX3-202ENST00000358730 CTSKP43235 329 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 MEF2AQ02078 507 aaPredicted RBP8.24□□□□□ -1.09
RFX3-202ENST00000358730 CD300CQ08708 224 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 FOXD4Q12950 439 aaPredicted RBP8.24□□□□□ -1.09
RFX3-202ENST00000358730 SLC39A5Q6ZMH5 540 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 RNF130Q86XS8 419 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 TRAPPC5Q8IUR0 188 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 OXR1Q8N573 874 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 OR4C15Q8NGM1 316 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 PSMA8Q8TAA3 256 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 WDR48Q8TAF3 677 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 MRGPRX3Q96LB0 322 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 CFHR5Q9BXR6 569 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 ZNF556Q9HAH1 456 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 IMPAD1Q9NX62 359 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 WNT6Q9Y6F9 365 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 KIAA1549LQ6ZVL6 1849 aa8.24□□□□□ -1.09
RFX3-202ENST00000358730 CLCA1A8K7I4 914 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 M0R082 166 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ADH1AP07327 375 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ANXA8P13928 327 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 TGM1P22735 817 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 CD40LGP29965 261 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 TAS2R50P59544 299 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 CDK6Q00534 326 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 C2orf80Q0P641 193 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 SLC5A12Q1EHB4 618 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 MICAQ29983 383 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ERAP2Q6P179 960 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 TRIM40Q6P9F5 258 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 LILRA6Q6PI73 481 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 LIPIQ6XZB0 460 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ZNF605Q86T29 641 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.23□□□□□ -1.09
RFX3-202ENST00000358730 CFAP206Q8IYR0 622 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 DEPDC4Q8N2C3 294 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 ZNF557Q8N988 423 aaPredicted RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 GOT1L1Q8NHS2 421 aaPredicted RBP8.23□□□□□ -1.09
RFX3-202ENST00000358730 RHOXF1Q8NHV9 184 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 GGHQ92820 318 aa8.23□□□□□ -1.09
RFX3-202ENST00000358730 EFCAB11Q9BUY7 163 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms